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13_1_40cm_scaffold_1954

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1954_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..2386)
DNA (2385bp) protein (795aa)
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
TonB-dependent receptor id=24469669 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
TonB-dependent receptor, plug
13_1_40cm_scaffold_1954_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2585..4582)
DNA (1998bp) protein (666aa)
Tetratricopeptide TPR_4 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QJ1_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
TPR repeat-containing protein
13_1_40cm_scaffold_1954_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5030..5959
DNA (930bp) protein (310aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_1954_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6042..9023)
DNA (2982bp) protein (994aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFF1_9BACT
Hypothetical conserved protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
TonB-dependent receptor
13_1_40cm_scaffold_1954_5
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

9192..11426
DNA (2235bp) protein (745aa)
sulfatase id=17029873 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
sulfatase Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
sulfatase
13_1_40cm_scaffold_1954_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11508..14414)
DNA (2907bp) protein (969aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFF1_9BACT
CnaB domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_scaffold_1954_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14613..15116)
DNA (504bp) protein (168aa)
F0F1 ATP synthase subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ATP synthase F0 subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] id=12556693 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
F0F1 ATP synthase subunit B
13_1_40cm_scaffold_1954_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15129..15353)
DNA (225bp) protein (75aa)
ATP synthase F0, C subunit; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00036976CB
ATP synthase subunit C
13_1_40cm_scaffold_1954_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15378..16319)
DNA (942bp) protein (314aa)
F0F1 ATP synthase subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
F0F1 ATP synthase subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] id=12556691 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
F0F1 ATP synthase subunit A
13_1_40cm_scaffold_1954_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16326..16688)
DNA (363bp) protein (121aa)
id=12556690 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12556690 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_1954_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16685..16927)
DNA (243bp) protein (81aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12556689 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_1954_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17224..18474)
DNA (1251bp) protein (417aa)
nuoN; NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I, chain N) (NDH-1, chain N) (EC:1.6.99.5 1.6.5.3) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nuoN; NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I, chain N) (NDH-1, chain N) (EC:1.6.99.5 1.6.5.3)
NADH-quinone oxidoreductase subunit N n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF5_9BACT
Displaying 12 items

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