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13_1_40cm_scaffold_3126

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3126_1
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

264..551
DNA (288bp) protein (96aa)
Gll3705 protein id=1750058 bin=GWD2_Desulfuromonadales_54_10 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CDI03547.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
hypothetical protein
13_1_40cm_scaffold_3126_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(633..1268)
DNA (636bp) protein (212aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
RNA-binding protein RNP-3 id=12556015 bin=CNBR_ACIDO species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNP-1 like RNA-binding protein
13_1_40cm_scaffold_3126_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1294..1713
DNA (420bp) protein (140aa)
peptidase M28 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_3126_4
unknown

Not on your lists

1710..2051
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_scaffold_3126_5
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2061..2516
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UJU5_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC49271.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_scaffold_3126_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2667..3905)
DNA (1239bp) protein (413aa)
Major facilitator superfamily MFS_1 n=1 Tax=halophilic archaeon DL31 RepID=G2MI54_9ARCH
major facilitator superfamily protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
major facilitator superfamily protein
13_1_40cm_scaffold_3126_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4002..4424
DNA (423bp) protein (141aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=3479344 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein
13_1_40cm_scaffold_3126_8
unknown

Not on your lists

comp(4431..4775)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_scaffold_3126_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5049..5834
DNA (786bp) protein (262aa)
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555325 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator
13_1_40cm_scaffold_3126_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5949..8399
DNA (2451bp) protein (817aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q3D8_9DELT
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
coxL; aerobic-type carbon monoxide dehydrogenase, large subunit
13_1_40cm_scaffold_3126_11
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8538..10256)
DNA (1719bp) protein (573aa)
ggt; gamma-glutamyltranspeptidase (EC:2.3.2.2)
gamma-glutamyltranspeptidase n=1 Tax=Sphingobium chinhatense RepID=UPI0003751C90
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:KER35844.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
13_1_40cm_scaffold_3126_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10304..11485
DNA (1182bp) protein (394aa)
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
major facilitator superfamily transporter; K08151 MFS transporter, DHA1 family, tetracycline resistance protein id=14631585 bin=bin9_gal15 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
major facilitator superfamily transporter
13_1_40cm_scaffold_3126_13
unknown

Not on your lists

comp(11657..11821)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_scaffold_3126_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11940..12143)
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_3126_15
unknown

Not on your lists

12348..12641
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_scaffold_3126_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12642..14450)
DNA (1809bp) protein (603aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
multi-sensor hybrid histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C53D1
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_3126_17
unknown

Not on your lists

14533..15006
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_scaffold_3126_18
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14945..15787)
DNA (843bp) protein (281aa)
xylose isomerase domain-containing protein id=3745139 bin=GWF2_Lentisphaerae_49_21 species=Anabaena sp. 90 genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
xylose isomerase domain-containing protein Tax=GWF2_Lentisphaerae_49_21_curated
13_1_40cm_scaffold_3126_19
unknown

Not on your lists

comp(15787..16095)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_scaffold_3126_20
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17074..18012)
DNA (939bp) protein (313aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Herbaspirillum sp. CF444 RepID=J3CZG7_9BURK
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EJL81421.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbasp
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_3126_21
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18012..19517)
DNA (1506bp) protein (502aa)
ADP-heptose synthase (EC:2.7.-.-)
ADP-heptose synthase n=1 Tax=Anabaena sp. 90 RepID=K7WC58_9NOST
ADP-heptose synthase Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
13_1_40cm_scaffold_3126_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19514..20251)
DNA (738bp) protein (246aa)
tal; transaldolase (EC:2.2.1.2) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
tal; transaldolase (EC:2.2.1.2)
Transaldolase id=2211029 bin=GWB2_Proteobacteria_55_19 species=Leptospirillum rubarum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
13_1_40cm_scaffold_3126_23
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(20248..20787)
DNA (540bp) protein (180aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="u
D,D-heptose 1,7-bisphosphate phosphatase id=2211028 bin=GWB2_Proteobacteria_55_19 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
phosphatase
13_1_40cm_scaffold_3126_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(20784..21386)
DNA (603bp) protein (201aa)
sugar isomerase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379A3EC
Sugar isomerase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Sugar isomerase family protein
13_1_40cm_scaffold_3126_25
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(21383..22105)
DNA (723bp) protein (241aa)
Glycosyl transferase, group 2 family protein id=3137166 bin=GWC2_Elusimicrobia_64_44 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
glycosyl transferase family protein
13_1_40cm_scaffold_3126_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(22086..24002)
DNA (1917bp) protein (639aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=2 Tax=Singulisphaera acidiphila RepID=L0DEV8_SINAD
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGA27216.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetace
13_1_40cm_scaffold_3126_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

24373..25647
DNA (1275bp) protein (425aa)
id=12557763 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Ca2+-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_3126_28
unknown

Not on your lists

25644..26411
DNA (768bp) protein (256aa)

This feature has no annotations

13_1_40cm_scaffold_3126_29
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

27488..28477
DNA (990bp) protein (330aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHS4_KORVE
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
daunorubicin resistance ABC transporter ATPase subunit
13_1_40cm_scaffold_3126_30
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

28556..29668
DNA (1113bp) protein (371aa)
ABC multidrug efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHS5_KORVE
ABC multidrug efflux pump, inner membrane subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ABC multidrug efflux pump, inner membrane subunit
Displaying items 1-30 of 31 in total

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