ggKbase home page

13_1_40cm_scaffold_3754

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3754_1
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1122)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y268_SORCE
oxidoreductase Tax=CG_Delta_07
hypothetical protein
13_1_40cm_scaffold_3754_2
RLO_PLX_64_10, Bacteria

Not on your lists

comp(1729..2025)
DNA (297bp) protein (99aa)
Putative uncharacterized protein id=3435282 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_40cm_scaffold_3754_3
RLO_PLX_64_10, Bacteria

Not on your lists

comp(2022..3137)
DNA (1116bp) protein (372aa)
BNR/Asp-box repeat protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECP5_9CHLR
BNR/Asp-box repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
BNR/Asp-box repeat-containing protein
13_1_40cm_scaffold_3754_4
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

3388..4077
DNA (690bp) protein (230aa)
ABC transporter; ATPase component; K02003 putative ABC transport system ATP-binding protein id=17228387 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Synergistetes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
ABC transporter, ATPase subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
ABC transporter ATPase
13_1_40cm_scaffold_3754_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4074..5426
DNA (1353bp) protein (451aa)
Cell division protein FtsX n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMS3_KORVE
cell division protein FtsX
Cell division protein FtsX {ECO:0000313|EMBL:ABF41827.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (st
13_1_40cm_scaffold_3754_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5506..6303)
DNA (798bp) protein (266aa)
Phospholipase/Carboxylesterase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SGX3_GEOOG
phospholipase/carboxylesterase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
phospholipase/carboxylesterase
13_1_40cm_scaffold_3754_7
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

6495..6920
DNA (426bp) protein (142aa)
dehydrogenase n=1 Tax=Nevskia ramosa RepID=UPI0003B3AC2A
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
hypothetical protein
13_1_40cm_scaffold_3754_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7022..7951)
DNA (930bp) protein (310aa)
DNA polymerase LigD polymerase domain n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFE5_ANADF
DNA polymerase LigD polymerase subunit
DNA polymerase LigD polymerase domain {ECO:0000313|EMBL:ABS27441.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_1_40cm_scaffold_3754_9
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7897..8721)
DNA (825bp) protein (275aa)
Predicted ATP-dependent DNA ligase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3B2_UNCMA
ATP-dependent DNA ligase
Predicted ATP-dependent DNA ligase {ECO:0000313|EMBL:CAJ37131.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella
13_1_40cm_scaffold_3754_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8718..10247)
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X30_SOLUE
leucine-rich repeat cysteine-containing subtype
Leucine-rich repeat cysteine-containing subtype {ECO:0000313|EMBL:AHG93027.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_3754_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(10244..11344)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036F12F5
Ankyrin
Ankyrin {ECO:0000313|EMBL:AIE86829.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348
13_1_40cm_scaffold_3754_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11520..12746)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKL1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88901.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_3754_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

12905..13645
DNA (741bp) protein (247aa)
Signal transduction histidine kinase, LytS n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025Y3_SOLUE
signal transduction histidine kinase LytS Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
signal transduction histidine kinase LytS
Displaying 13 items

View Taxonomy