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13_1_40cm_scaffold_4746

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4746_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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1..885
DNA (885bp) protein (295aa)
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
K(+)-insensitive pyrophosphate-energized proton pump id=3585892 bin=GWF2_Methylomirabilis_70_14 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hppA; membrane-bound proton-translocating pyrophosphatase
13_1_40cm_scaffold_4746_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1081..1791
DNA (711bp) protein (237aa)
TonB-like protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TonB-like protein; K03832 periplasmic protein TonB id=12556587 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB family protein
13_1_40cm_scaffold_4746_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1904..2500
DNA (597bp) protein (199aa)
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB id=12556586 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MotA/TolQ/ExbB proton channel
13_1_40cm_scaffold_4746_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2627..3064
DNA (438bp) protein (146aa)
biopolymertransporter ExbD/TolR; K03560 biopolymer transport protein TolR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
TolR protein; K03560 biopolymer transport protein TolR id=12556585 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
biopolymer transport protein ExbD/TolR
13_1_40cm_scaffold_4746_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

3064..3534
DNA (471bp) protein (157aa)
biopolymertransporter ExbD/TolR; K03559 biopolymer transport protein ExbD Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR id=12556584 bin=CNBR_ACIDO species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative biopolymer transport protein
13_1_40cm_scaffold_4746_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3699..4259
DNA (561bp) protein (187aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024Q0_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ83526.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" so
13_1_40cm_scaffold_4746_7
unknown

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4256..4801
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_40cm_scaffold_4746_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4875..5762
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024P8_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:CDM65803.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_scaffold_4746_9
unknown

Not on your lists

5860..5967
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_scaffold_4746_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5929..9126)
DNA (3198bp) protein (1066aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein id=12557281 bin=CNBR_ACIDO species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_4746_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9261..10229)
DNA (969bp) protein (323aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
tetratricopeptide repeat protein id=12556583 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_4746_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

10339..12510
DNA (2172bp) protein (724aa)
(p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] id=12556582 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
(p)ppGpp synthetase SpoT/RelA
13_1_40cm_scaffold_4746_13
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

12585..12773
DNA (189bp) protein (63aa)
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein; K02004 putative ABC transport system permease protein id=12554781 bin=CNBR_ACIDO species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_4746_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12924..13307)
DNA (384bp) protein (128aa)
Putative endoribonuclease L-PSP n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5H1_HERA2
endoribonuclease L-PSP Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
endoribonuclease L-PSP
13_1_40cm_scaffold_4746_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists


comp(13304..13495)
DNA (192bp) protein (64aa)
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=12556580 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L28
13_1_40cm_scaffold_4746_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(13544..14185)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000372D053
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_scaffold_4746_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14259..14834
DNA (576bp) protein (192aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Putative uncharacterized protein id=2233900 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_4746_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

15241..15702
DNA (462bp) protein (154aa)
dksA; DnaK suppressor protein; K06204 DnaK suppressor protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
DnaK suppressor protein; K06204 DnaK suppressor protein id=12556579 bin=CNBR_ACIDO species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator, TraR/DksA family
13_1_40cm_scaffold_4746_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15794..18244
DNA (2451bp) protein (817aa)
ATP-dependent protease La; K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ATP-dependent protease La; K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=12556578 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent protease La
13_1_40cm_scaffold_4746_20
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

18423..18833
DNA (411bp) protein (137aa)
histone deacetylase superfamily protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
histone deacetylase superfamily protein id=16901405 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
histone deacetylase superfamily protein
Displaying 20 items

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