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13_1_40cm_scaffold_4773

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4773_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1..264
DNA (264bp) protein (88aa)
Pyrrolo-quinoline quinone n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VF3_SOLUE
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ86362.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
13_1_40cm_scaffold_4773_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(435..680)
DNA (246bp) protein (82aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08PC3_STIAD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_scaffold_4773_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(690..3590)
DNA (2901bp) protein (967aa)
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TonB-dependent receptor id=12556886 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB-dependent receptor
13_1_40cm_scaffold_4773_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3755..4093
DNA (339bp) protein (113aa)
PadR family transcripitonal regulator n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035D0D12
transcriptional regulator, PadR-family
Transcriptional regulator, PadR-family {ECO:0000313|EMBL:AHG89735.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_4773_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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4153..6783
DNA (2631bp) protein (877aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UZ0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86525.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_scaffold_4773_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(6834..8285)
DNA (1452bp) protein (484aa)
Beta-lactamase domain protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IXH5_9GAMM
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
beta-lactamase domain-containing protein
13_1_40cm_scaffold_4773_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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8431..11031
DNA (2601bp) protein (867aa)
leucyl-tRNA synthetase (EC:6.1.1.4 6.1.1.9); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=12555173 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
leuS; leucine--tRNA ligase (EC:6.1.1.4)
13_1_40cm_scaffold_4773_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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11081..11632
DNA (552bp) protein (184aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=12555174 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_4773_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

11717..12742
DNA (1026bp) protein (342aa)
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
id=12555175 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HolA; DNA polymerase III, delta subunit
13_1_40cm_scaffold_4773_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(12815..13078)
DNA (264bp) protein (88aa)
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 id=12555176 bin=CNBR_ACIDO species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsT; 30S ribosomal protein S20
13_1_40cm_scaffold_4773_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13275..13910
DNA (636bp) protein (212aa)
ABC transporter, ATP-binding protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TLT4_9DELT
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG87772.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 11 items

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