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13_1_40cm_scaffold_787

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_787_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(3..2276)
DNA (2274bp) protein (758aa)
TonB-dependent receptor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y43_SOLUE
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TonB-dependent receptor
13_1_40cm_scaffold_787_2
unknown

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3029..3277
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_scaffold_787_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(3476..6568)
DNA (3093bp) protein (1031aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036DE817
TonB-dependent receptor domain protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
outer membrane receptor protein
13_1_40cm_scaffold_787_4
unknown

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6883..7071
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_scaffold_787_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7498..7911)
DNA (414bp) protein (138aa)
hypothetical protein; K07065 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Probable ribonuclease VapC id=4289403 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
13_1_40cm_scaffold_787_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(7892..8164)
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_scaffold_787_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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8550..9515
DNA (966bp) protein (322aa)
Patatin n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VE8_SOLUE
patatin
Patatin {ECO:0000313|EMBL:ABJ86367.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6
13_1_40cm_scaffold_787_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9680..10513
DNA (834bp) protein (278aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteo
Dihydrodipicolinate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW70_9GAMM
13_1_40cm_scaffold_787_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10583..11503
DNA (921bp) protein (307aa)
LysR family transcriptional regulator YnfL n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KIA9_STEMA
LysR family transcriptional regulator YnfL
LysR family transcriptional regulator YnfL {ECO:0000313|EMBL:CCH10798.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Ste
13_1_40cm_scaffold_787_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11530..12612)
DNA (1083bp) protein (361aa)
hypothetical protein id=12557309 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
XRE family transcriptional regulator
13_1_40cm_scaffold_787_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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13459..16485
DNA (3027bp) protein (1009aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000376B06A
Predicted periplasmic ligand-binding sensor domain {ECO:0000313|EMBL:CDM65942.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyla
sensor protein
13_1_40cm_scaffold_787_12

Not on your lists

16482..17132
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379C3CB
Response regulator {ECO:0000313|EMBL:AGW45550.1}; TaxID=1403002 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac161.;"
two-component response regulator
13_1_40cm_scaffold_787_13

Not on your lists

17308..17682
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379C782
Transcriptional regulator {ECO:0000313|EMBL:AGW45549.1}; TaxID=1403002 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac161.;"
DNA-binding response regulator, LuxR family
13_1_40cm_scaffold_787_14
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17703..18281
DNA (579bp) protein (193aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SZ18_PLAL2
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADG69919.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Plan
13_1_40cm_scaffold_787_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

18555..19238
DNA (684bp) protein (228aa)
methionine synthase (B12-independent) (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
methionine synthase (B12-independent) (EC:2.1.1.14)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI000361F139
Displaying 15 items

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