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13_1_40cm_scaffold_16577

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_16577_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3..332)
DNA (330bp) protein (110aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
adenylate kinase n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B53B4E
adenylate kinase
13_1_40cm_scaffold_16577_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(332..1609)
DNA (1278bp) protein (426aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Protein translocase subunit SecY id=4362170 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
preprotein translocase subunit SecY
13_1_40cm_scaffold_16577_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(1621..1896)
DNA (276bp) protein (92aa)
50S ribosomal protein L15 n=2 Tax=Rhodothermus marinus RepID=D0MGX3_RHOM4
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L15
13_1_40cm_scaffold_16577_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(2159..2668)
DNA (510bp) protein (170aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=14629533 bin=bin8_Chloro species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
rpsE; 30S ribosomal protein S5
13_1_40cm_scaffold_16577_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(2756..3604)
DNA (849bp) protein (283aa)
50S ribosomal protein L6 n=1 Tax=Streptomyces sulphureus RepID=UPI00031C301E
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplF; 50S ribosomal protein L6
13_1_40cm_scaffold_16577_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(3601..4179)
DNA (579bp) protein (193aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S8 id=4362160 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
rpsH; ribosomal protein S8
13_1_40cm_scaffold_16577_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists


comp(4188..4373)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z id=4362159 bin=GWC2_Chloroflexi_73_18 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=GWC2_RIF_CHLX_73_18_curated
rpsN; 30S ribosomal protein S14
13_1_40cm_scaffold_16577_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(4384..4932)
DNA (549bp) protein (183aa)
50S ribosomal protein L5 n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RL5_SYMTH
rplE; 50S ribosomal protein L5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplE; 50S ribosomal protein L5
13_1_40cm_scaffold_16577_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(4929..5267)
DNA (339bp) protein (113aa)
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplX; 50S ribosomal protein L24
13_1_40cm_scaffold_16577_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(5268..5636)
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L14 id=4362127 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L14
13_1_40cm_scaffold_16577_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(5633..6247)
DNA (615bp) protein (205aa)
30S ribosomal protein S17 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=14629541 bin=bin8_Chloro species=Alicyclobacillus acidoterrestris genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S17
13_1_40cm_scaffold_16577_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(6240..6440)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=2 Tax=Dehalococcoides mccartyi RepID=D2BGY0_DEHSV
potB; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpmC; 50S ribosomal protein L29
13_1_40cm_scaffold_16577_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(6415..6858)
DNA (444bp) protein (148aa)
50S ribosomal protein L16 n=1 Tax=Orenia marismortui RepID=UPI0003822F02
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L16
13_1_40cm_scaffold_16577_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(6858..7538)
DNA (681bp) protein (227aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpsC; 30S ribosomal protein S3 id=14629544 bin=bin8_Chloro species=unknown genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S3
13_1_40cm_scaffold_16577_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(7541..7876)
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=2 Tax=Thermotoga RepID=RL22_THESQ
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplV; 50S ribosomal protein L22
13_1_40cm_scaffold_16577_16
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists


comp(7878..8243)
DNA (366bp) protein (122aa)
30S ribosomal protein S19 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2G9_CLOCD
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_16_Chloroflexi_64_43_curated
30S ribosomal protein S19
13_1_40cm_scaffold_16577_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(8240..9079)
DNA (840bp) protein (280aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=14629547 bin=bin8_Chloro species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L2
13_1_40cm_scaffold_16577_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(9082..9378)
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8J3_9FIRM
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplW; 50S ribosomal protein L23
13_1_40cm_scaffold_16577_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(9375..10169)
DNA (795bp) protein (265aa)
rplD; 50S ribosomal protein L4 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L4 id=4362118 bin=GWC2_Chloroflexi_73_18 species=Bacillus alcalophilus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L4P
Displaying 19 items

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