ggKbase home page

13_1_40cm_scaffold_18351

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_18351_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3..806)
DNA (804bp) protein (268aa)
glucose sorbosone dehydrogenase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Subtilisin-like serine proteases (Peptidase S8 family) id=4041157 bin=GWC2_TM7_44_17 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
13_1_40cm_scaffold_18351_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(840..1841)
DNA (1002bp) protein (334aa)
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
N-acetyltransferase GCN5 id=14631198 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
N-acetyltransferase GCN5
13_1_40cm_scaffold_18351_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1882..2547)
DNA (666bp) protein (222aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] id=14628966 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin8_Chloro organism_group=Chloroflexi
rnhB; ribonuclease HII
13_1_40cm_scaffold_18351_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(2597..2806)
DNA (210bp) protein (70aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=14628965 bin=bin8_Chloro species=Lactobacillus versmoldensis genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
rplS; 50S ribosomal protein L19
13_1_40cm_scaffold_18351_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2790..3938)
DNA (1149bp) protein (383aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=TRMD_CHLAD
13_1_40cm_scaffold_18351_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3938..4462)
DNA (525bp) protein (175aa)
Ribosome maturation factor RimM n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLE2_9FIRM
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rimM; 16S rRNA-processing protein RimM
13_1_40cm_scaffold_18351_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4431..4685)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287F3B5
RNA binding protein; K06960 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
RNA binding protein
13_1_40cm_scaffold_18351_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(4682..6526)
DNA (1845bp) protein (615aa)
Signal recognition particle protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I2I7_SULAT
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
signal recognition particle subunit FFH/SRP54 (srp54)
13_1_40cm_scaffold_18351_9
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6526..7284)
DNA (759bp) protein (253aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A4U0_9GAMM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EAQ98811.2}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregi
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
13_1_40cm_scaffold_18351_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7281..8033)
DNA (753bp) protein (251aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
diguanylate phosphodiesterase
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) id=1321118 bin=GWE1_T_denit_62_9 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
13_1_40cm_scaffold_18351_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8053..8871)
DNA (819bp) protein (273aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW8_9GAMM
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ftsY; cell division protein FtsY
Displaying 11 items

View Taxonomy