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13_1_40cm_scaffold_31811

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_31811_1
unknown

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comp(1..786)
DNA (786bp) protein (262aa)

This feature has no annotations

13_1_40cm_scaffold_31811_2
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(776..1276)
DNA (501bp) protein (167aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TQU0_THETC
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADL67916.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incert
13_1_40cm_scaffold_31811_3
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(1329..1514)
DNA (186bp) protein (62aa)
Glucose sorbosone dehydrogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8D0_9ARCH
glucose sorbosone dehydrogenase
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:BAJ48549.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_40cm_scaffold_31811_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(1554..2540)
DNA (987bp) protein (329aa)
Quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Glucose sorbosone dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPQ4_9BACT
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:BAL58140.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
13_1_40cm_scaffold_31811_5
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2537..3178)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035F6ABB
Phosphodiesterase {ECO:0000313|EMBL:EWC63516.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
putative phosphodiesterase
13_1_40cm_scaffold_31811_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(3175..4221)
DNA (1047bp) protein (349aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RUVB_MOOTA
13_1_40cm_scaffold_31811_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(4209..5870)
DNA (1662bp) protein (554aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Proline--tRNA ligase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SGY6_9BACL
prolyl-tRNA synthetase
13_1_40cm_scaffold_31811_8
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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6175..7653
DNA (1479bp) protein (493aa)
Oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PW96_CLOSD
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYE87823.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidi
oppA; oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily
13_1_40cm_scaffold_31811_9

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7711..8637
DNA (927bp) protein (309aa)
Nickel-transporting ATPase n=5 Tax=Dehalococcoides mccartyi RepID=A5FQK1_DEHSB
Marine sediment metagenome DNA, contig: S01H4_C00393 {ECO:0000313|EMBL:GAG71751.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
PepT transporter family, permease
13_1_40cm_scaffold_31811_10
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8634..9506
DNA (873bp) protein (291aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21J39_SACD2
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABD81290.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadace
13_1_40cm_scaffold_31811_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(9503..10255)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VUC5_9ACTO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_31811_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(10230..11045)
DNA (816bp) protein (272aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0I8_THERP
13_1_40cm_scaffold_31811_13
unknown

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comp(11398..11529)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 13 items

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