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13_1_40cm_scaffold_178

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_178_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..425)
DNA (423bp) protein (141aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_178_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(560..4036)
DNA (3477bp) protein (1159aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_178_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4145..4960)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide repeat-containing protein
13_1_40cm_scaffold_178_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4971..5585)
DNA (615bp) protein (205aa)
Putative peptidoglycan-associated lipoprotein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F8_GEMAT
pal; putative peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidoglycan-associated lipoprotein
13_1_40cm_scaffold_178_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5606..7018)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F9_GEMAT
hypothetical protein; K03641 TolB protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
WD40-like beta Propeller containing protein
13_1_40cm_scaffold_178_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7015..7704)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G0_GEMAT
Putative periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB domain-containing protein
13_1_40cm_scaffold_178_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7701..8138)
DNA (438bp) protein (146aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G1_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative biopolymer transport protein
13_1_40cm_scaffold_178_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8139..8876)
DNA (738bp) protein (246aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G2_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RBG_16_Gemmatimonadetes_66_8_curated
MotA/TolQ/ExbB proton channel
13_1_40cm_scaffold_178_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8914..9897)
DNA (984bp) protein (328aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase id=4952052 bin=GWC2_Chloroflexi_73_18 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
UDP-glucose-4-epimerase Tax=GWC2_RIF_CHLX_73_18_curated
13_1_40cm_scaffold_178_10
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9887..11149)
DNA (1263bp) protein (421aa)
Glutamyl-tRNA reductase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIY0_DESK7
glutamyl-tRNA reductase
Tax=BJP_IG2102_Coriobacteriales_64_17
13_1_40cm_scaffold_178_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11164..11958)
DNA (795bp) protein (265aa)
cytochrome c biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cytochrome c-type biogenesis protein CcsB id=4800841 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_178_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11998..13281)
DNA (1284bp) protein (428aa)
LysM domain-containing protein id=7200269 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
uncharacterized protein containing LysM domain
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_178_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13253..13735)
DNA (483bp) protein (161aa)
Single-stranded DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G5_GEMAT
ssb; single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
single-strand binding protein
13_1_40cm_scaffold_178_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13830..14258)
DNA (429bp) protein (143aa)
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AHG91095.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribosomal-protein-alanine acetyltransferase id=4044136 bin=GWF2_Nitrospirae_44_13 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
13_1_40cm_scaffold_178_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14260..15000)
DNA (741bp) protein (247aa)
tRNA threonylcarbamoyl adenosine modification protein YeaZ n=1 Tax=Selenomonas sp. CM52 RepID=J6I0Y9_9FIRM
peptidase M22 glycoprotease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
universal protein YeaZ
13_1_40cm_scaffold_178_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15161..15580)
DNA (420bp) protein (140aa)
ATPase YjeE n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FJA3_9GAMM
putative protein family UPF0079, ATPase
Uncharacterized protein {ECO:0000313|EMBL:AHG91097.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_178_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15531..17555)
DNA (2025bp) protein (675aa)
UvrABC system protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRB_GEMAT
uvrB; UvrABC system protein B
UvrABC system protein B {ECO:0000255|HAMAP-Rule:MF_00204}; Short=Protein UvrB {ECO:0000255|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000255|HAMAP-Rule:MF_00204}; TaxID=379066 species="Ba
13_1_40cm_scaffold_178_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17566..19746)
DNA (2181bp) protein (727aa)
GTP pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H2_GEMAT
RelA/SpoT family protein
RelA/SpoT family protein {ECO:0000313|EMBL:AHG91100.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_178_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19891..20574)
DNA (684bp) protein (228aa)
DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H3_GEMAT
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein RadC
13_1_40cm_scaffold_178_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20720..21724)
DNA (1005bp) protein (335aa)
Protein translocase subunit SecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H8_GEMAT
secA; preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA Tax=RBG_16_Gemmatimonadetes_66_8_curated
secA; preprotein translocase SecA subunit
Displaying 20 items

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