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13_1_40cm_scaffold_380

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_380_1
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2..940)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B6A202
putative signaling protein Tax=RBG_16_Chloroflexi_52_11_curated
multi-sensor hybrid histidine kinase
13_1_40cm_scaffold_380_2
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(1195..1638)
DNA (444bp) protein (148aa)
sensory transduction regulatory protein Tax=RBG_13_Nitrospirae_43_8_curated
response regulator receiver protein id=14426277 bin=bin1_lowGC species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
response regulator receiver protein
13_1_40cm_scaffold_380_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1701..3680)
DNA (1980bp) protein (660aa)
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4197759 bin=GWC2_Deltaproteobacteria_66_88 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
PAS sensor protein
13_1_40cm_scaffold_380_trna_1
unknown

Not on your lists

comp(3697..3769)
DNA (73bp)
transferRNA
13_1_40cm_scaffold_380_4
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(3806..4675)
DNA (870bp) protein (290aa)
hypothetical protein id=7202063 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
hypothetical protein
13_1_40cm_scaffold_380_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4680..6233)
DNA (1554bp) protein (518aa)
Response regulator receiver id=3068376 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histidine kinase Tax=GWC2_Rokubacteria_70_16_curated
histidine kinase
13_1_40cm_scaffold_380_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6233..9037)
DNA (2805bp) protein (935aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9P0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
excinuclease ABC, A subunit
13_1_40cm_scaffold_380_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9143..10225
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y147_SORCE
hypothetical protein; K07027 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_380_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10347..11828
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7L5S0_9ACTO
FHA domain-containing protein; K02283 pilus assembly protein CpaF Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits
13_1_40cm_scaffold_380_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11907..12620
DNA (714bp) protein (238aa)
putative serine/threonine protein phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative serine/threonine protein phosphatase (EC:3.1.3.16)
Putative serine/threonine protein phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N8_GEMAT
13_1_40cm_scaffold_380_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12849..14120)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N5_GEMAT
hypothetical protein; K06885 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metal-dependent phosphohydrolase HD sub domain-containing protein
13_1_40cm_scaffold_380_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14117..15736)
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N1_GEMAT
Phosphoenolpyruvate carboxykinase [ATP]
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
13_1_40cm_scaffold_380_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15733..18000)
DNA (2268bp) protein (756aa)
malic enzyme (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XW7_SOLUE
phosphate acetyl/butaryl transferase
13_1_40cm_scaffold_380_13
unknown

Not on your lists

comp(18058..18672)
DNA (615bp) protein (205aa)

This feature has no annotations

Displaying 14 items

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