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13_1_40cm_scaffold_10380

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_10380_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..896)
DNA (894bp) protein (298aa)
GTPase HflX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C4_GEMAT
GTP-binding protein, HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708
13_1_40cm_scaffold_10380_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1124..1870
DNA (747bp) protein (249aa)
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W7_GEMAT
sugar transferase
Sugar transferase {ECO:0000313|EMBL:AHG90032.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_10380_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1851..3026)
DNA (1176bp) protein (392aa)
glycosyl transferase group 2 protein (EC:2.4.1.-)
Glycosyl transferase, group 2 {ECO:0000313|EMBL:CBK42567.1}; EC=2.4.1.- {ECO:0000313|EMBL:CBK42567.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source
Glycosyl transferase, group 2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PH30_9BACT
13_1_40cm_scaffold_10380_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3023..4093)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNH3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33320.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_scaffold_10380_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(4090..5247)
DNA (1158bp) protein (386aa)
putative oxidoreductase; K15736 L-2-hydroxyglutarate oxidase [EC:1.1.3.-] Tax=RBG_13_Acidobacteria_68_16_curated
Putative oxidoreductase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5S8_ANATU id=5224033 bin=16ft_combo_ws3_JS1 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hydroxyglutarate oxidase
13_1_40cm_scaffold_10380_6
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5292..6224)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036D3E76
Polysaccharide deacetylase
Uncharacterized protein {ECO:0000313|EMBL:AJE22969.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
13_1_40cm_scaffold_10380_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(6279..7127)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJT RepID=UPI00036EC2A8
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
polysaccharide deacetylase
13_1_40cm_scaffold_10380_8
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7214..7813)
DNA (600bp) protein (200aa)
epsP; low molecular weight protein-tyrosine-phosphatase epsP (EC:3.1.3.48)
EpsP n=2 Tax=Ralstonia solanacearum RepID=A3RXW0_RALSL
Probable low molecular weight protein-tyrosine-phosphatase epsp {ECO:0000313|EMBL:CEJ17347.1}; Protein tyrosine phosphatase {ECO:0000313|EMBL:KFX28843.1}; TaxID=305 species="Bacteria; Proteobacteria;
13_1_40cm_scaffold_10380_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7810..8358)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_10380_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8307..9602)
DNA (1296bp) protein (432aa)
ATPase (EC:3.6.-.-); K07478 putative ATPase Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C6_GEMAT
MgsA AAA+ ATPase domain-containing protein
13_1_40cm_scaffold_10380_11
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists


9763..10119
DNA (357bp) protein (119aa)
30S ribosomal protein S23 n=1 Tax=Hippea alviniae RepID=UPI0003B4E5EA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
S23 ribosomal protein
13_1_40cm_scaffold_10380_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10227..10946)
DNA (720bp) protein (240aa)
metal cation transporter, ZIP family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
zinc/iron permease
Zinc/iron transporter id=1250910 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_scaffold_10380_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10939..12060)
DNA (1122bp) protein (374aa)
tRNA nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C8_GEMAT
tRNA nucleotidyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polynucleotide adenylyltransferase region
13_1_40cm_scaffold_10380_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12057..12818)
DNA (762bp) protein (254aa)
putative oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C9_GEMAT
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_10380_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12815..13378)
DNA (564bp) protein (188aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphoheptose isomerase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BSZ6_9FIRM
Phosphoheptose isomerase
13_1_40cm_scaffold_10380_16
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(13405..14148)
DNA (744bp) protein (248aa)
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=CG_Micra_04
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
geranylgeranylglyceryl phosphate synthase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B54552
13_1_40cm_scaffold_10380_17
unknown

Not on your lists

comp(14145..14417)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_scaffold_10380_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(14414..17044)
DNA (2631bp) protein (877aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D2_GEMAT
Alanine-tRNA ligase, eukaryota/bacteria
13_1_40cm_scaffold_10380_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17084..17671)
DNA (588bp) protein (196aa)
Regulatory protein RecX n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLM0_SORCE
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_10380_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(17671..18630)
DNA (960bp) protein (320aa)
Protein RecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D4_GEMAT
recA; RecA protein; K03553 recombination protein RecA Tax=RBG_16_Gemmatimonadetes_66_8_curated
recA; RecA protein
13_1_40cm_scaffold_10380_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18771..19163)
DNA (393bp) protein (131aa)
UPF0102 protein GAU_1918 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D5_GEMAT
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0102 protein yraN
13_1_40cm_scaffold_10380_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19301..20842)
DNA (1542bp) protein (514aa)
Cell division protein FtsK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D8_GEMAT
ftsK; cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RBG_16_Gemmatimonadetes_66_8_curated
ftsK; cell division protein FtsK
13_1_40cm_scaffold_10380_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(21431..22150)
DNA (720bp) protein (240aa)
2-phosphosulfolactate phosphatase; K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative 2-phosphosulfolactate phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D9_GEMAT
2-phosphosulfolactate phosphatase
13_1_40cm_scaffold_10380_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22147..23505)
DNA (1359bp) protein (453aa)
accC; acetyl-CoA carboxylase biotin carboxylase (EC:6.3.4.14); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acetyl-CoA carboxylase biotin carboxylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E0_GEMAT
acetyl-CoA carboxylase, biotin carboxylase
13_1_40cm_scaffold_10380_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23513..24625)
DNA (1113bp) protein (371aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E1_GEMAT
pilT; twitching mobility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pilT; twitching mobility protein
13_1_40cm_scaffold_10380_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(24618..25115)
DNA (498bp) protein (166aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E2_GEMAT
biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
13_1_40cm_scaffold_10380_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25184..26278)
DNA (1095bp) protein (365aa)
Putative Xaa-Pro dipeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E3_GEMAT
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:AHG91072.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_10380_28
Cyanobium gracile, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26268..26714)
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9PBF0_CYAGP
3-dehydroquinate dehydratase
13_1_40cm_scaffold_10380_29
unknown

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comp(26731..27450)
DNA (720bp) protein (240aa)

This feature has no annotations

13_1_40cm_scaffold_10380_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(27405..28322)
DNA (918bp) protein (306aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Tetratricopeptide repeat-containing protein
hypothetical protein id=7200674 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Displaying items 1-30 of 39 in total

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