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13_1_40cm_scaffold_1038_9

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: comp(5961..6686)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 257.0
  • Bit_score: 262
  • Evalue 6.10e-67
tRNA pseudouridine synthase A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 260.0
  • Bit_score: 231
  • Evalue 1.10e-57
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 259.0
  • Bit_score: 232
  • Evalue 1.00e-58

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Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 726
GTGACGAGCCGGCCCTTCCTCGCGGTAGTGCACTACGACGGGGCCCGGTTCGTGGGGTGGCAGCGTCAACCGCAAGGGCGCACCGTCCAGGCCGAAGTCGAGGCGGTGCTTGAGCGATTGGCCGGGTGCAAGACGACGGCCACCGGAGCGGGCCGCACCGATACCGGCGTACACGCGCTTGGTCAGGGTGTCGGCTTCACGCTTCCGGAGCGCTGGGCCGGCAATGTCCCGGGATCGCGGCGTGCGCTGAACGCGTTGCTACCCCGGGACATCTGGGTGGAGCGGGTGCACGCGATGCAGCCGGGCTTTCACGCGCGGCGGAGCGCGACGGCGCGTCGCTATCGCTATGTGATCGGGACCGACGAGTCCTGCCGCTCGCCGTTCCGCCGCCCCTACGAGTGGGCGTTGGGGAGCGGCCGCCCTCTCGATCTTGGGGCCGCCAAGCCTGACTACCGATGCCGCGTGGCGCTCGCCGAGTGGGCGCCGCGAGCGGACGGGACGGGCGTGACGTTTACAATCGAGGCAGATCGGTTCCTGCACCGGATGGTGCGCTTCCTGGTGGGCGCGATGGTCGACATCGCCCTGGGCCGACGACCGCCGTCGGATTTCCCCCGTTTGCTCACCGCCGGCGACAACCAGGCGGCCAGTCCGCCCGCTCCACCCCAGGGCCTGTACCTGGTTGCGGTGCGCTATCCTCCTCACCTCTACGCCGGGGCTGACTCATGA
PROTEIN sequence
Length: 242
VTSRPFLAVVHYDGARFVGWQRQPQGRTVQAEVEAVLERLAGCKTTATGAGRTDTGVHALGQGVGFTLPERWAGNVPGSRRALNALLPRDIWVERVHAMQPGFHARRSATARRYRYVIGTDESCRSPFRRPYEWALGSGRPLDLGAAKPDYRCRVALAEWAPRADGTGVTFTIEADRFLHRMVRFLVGAMVDIALGRRPPSDFPRLLTAGDNQAASPPAPPQGLYLVAVRYPPHLYAGADS*