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13_1_40cm_scaffold_1038

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1038_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..557)
DNA (555bp) protein (185aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_scaffold_1038_2
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(499..1215)
DNA (717bp) protein (239aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Acidobacteria_68_9_curated
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X374_9BACT
13_1_40cm_scaffold_1038_3
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(1215..1469)
DNA (255bp) protein (85aa)
purS; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Acidobacteria_68_9_curated
Phosphoribosylformylglycinamidine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V2_GEMAT
phosphoribosylformylglycinamidine synthase, purS
13_1_40cm_scaffold_1038_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(1469..2350)
DNA (882bp) protein (294aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=RBG_16_Acidobacteria_68_9_curated
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V1_GEMAT
13_1_40cm_scaffold_1038_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2347..3000)
DNA (654bp) protein (218aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=GWC2_Gemmatimonadetes_71_10_curated
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V0_GEMAT
Phosphatidylserine decarboxylase proenzyme
13_1_40cm_scaffold_1038_6
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(2997..3920)
DNA (924bp) protein (308aa)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RBG_16_Acidobacteria_68_9_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EU9_RHOPS
13_1_40cm_scaffold_1038_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3917..5254)
DNA (1338bp) protein (446aa)
Adenylosuccinate lyase n=1 Tax=uncultured planctomycete RepID=H5SIH7_9BACT
adenylosuccinate lyase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
adenylosuccinate lyase
13_1_40cm_scaffold_1038_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5296..5964)
DNA (669bp) protein (223aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative translaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RIA2_METVM
13_1_40cm_scaffold_1038_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5961..6686)
DNA (726bp) protein (242aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
tRNA pseudouridine synthase A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U6_GEMAT
tRNA pseudouridine synthase A
13_1_40cm_scaffold_1038_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6794..7849
DNA (1056bp) protein (352aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=861299 spe
Anthranilate phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U4_GEMAT
Anthranilate phosphoribosyltransferase
13_1_40cm_scaffold_1038_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7889..8497)
DNA (609bp) protein (203aa)
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
LexA repressor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U3_GEMAT
LexA repressor
13_1_40cm_scaffold_1038_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8556..9350
DNA (795bp) protein (265aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Indole-3-glycerol phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U2_GEMAT
Indole-3-glycerol phosphate synthase
13_1_40cm_scaffold_1038_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9370..10566
DNA (1197bp) protein (399aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium
Tryptophan synthase beta chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A955_GEMAT
Tryptophan synthase beta chain
13_1_40cm_scaffold_1038_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10626..12245
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A954_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_1038_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12242..13720
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A953_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_1038_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13713..14552
DNA (840bp) protein (280aa)
trpA; tryptophan synthase alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
trpA; tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A952_GEMAT
13_1_40cm_scaffold_1038_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14549..16630
DNA (2082bp) protein (694aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ52_RHOM4
chemotaxis protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methyl-accepting chemotaxis sensory transducer
13_1_40cm_scaffold_1038_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16715..17143
DNA (429bp) protein (143aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatim
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A5Y7_THEAQ
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_40cm_scaffold_1038_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17136..17951
DNA (816bp) protein (272aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W3R1_DESIS
13_1_40cm_scaffold_1038_20
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18002..18784
DNA (783bp) protein (261aa)
pantoate/beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
Pantothenate synthetase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A529_THECD
13_1_40cm_scaffold_1038_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18784..19278
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A951_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_40cm_scaffold_1038_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19275..19694
DNA (420bp) protein (140aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1038_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19632..20699)
DNA (1068bp) protein (356aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RLMN_GEMAT
hypothetical protein
13_1_40cm_scaffold_1038_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20696..21619)
DNA (924bp) protein (308aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_1038_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21670..22125
DNA (456bp) protein (152aa)
ptsN; phosphotransferase system enzyme IIA, regulates nitrogen metabolism; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative PTS IIA-like nitrogen-regulatory protein PtsN id=2244663 bin=GWB2_Proteobacteria_55_19 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
PTS IIA-like nitrogen-regulatory protein PtsN
13_1_40cm_scaffold_1038_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


22131..23894
DNA (1764bp) protein (588aa)
Aspartate--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A947_GEMAT
Aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHG90893.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1038_27
unknown

Not on your lists

23891..24025
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_scaffold_1038_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24000..24770
DNA (771bp) protein (257aa)
PhoH-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A946_GEMAT
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AHG90892.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1038_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24772..26952
DNA (2181bp) protein (727aa)
Putative domain HDIG-containing protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPX0_9FIRM
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG90891.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1038_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26981..27274
DNA (294bp) protein (98aa)
Endoribonuclease YbeY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A945_GEMAT
hypothetical protein
hypothetical protein; K07042 probable rRNA maturation factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 47 in total

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