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13_1_40cm_scaffold_4229

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4229_1
unknown

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comp(3..281)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_scaffold_4229_2
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

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310..1221
DNA (912bp) protein (304aa)
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_62_10_curated
ABC transporter permease; K02033 peptide/nickel transport system permease protein id=24442407 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptide transport system permease
13_1_40cm_scaffold_4229_3
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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1230..2153
DNA (924bp) protein (308aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=RBG_13_Euryarchaeota_57_23_curated
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=24442406 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_40cm_scaffold_4229_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2155..3156
DNA (1002bp) protein (334aa)
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein id=24442405 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_scaffold_4229_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3189..4946
DNA (1758bp) protein (586aa)
oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ABC transporter, ATP-binding component id=4397732 bin=GWC2_Chloroflexi_73_18 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
oligopeptide/dipeptide ABC transporter, ATPase subunit
13_1_40cm_scaffold_4229_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(4936..6213)
DNA (1278bp) protein (426aa)
Major Facilitator Superfamily transporter n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H7H3_9EURY
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_scaffold_4229_7

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6369..7010
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TK30_ALKMQ
Marine sediment metagenome DNA, contig: S01H4_C00310 {ECO:0000313|EMBL:GAG70290.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_scaffold_4229_8
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6952..7101
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000375A9F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ47257.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
13_1_40cm_scaffold_4229_9
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7114..8094)
DNA (981bp) protein (327aa)
Putative glutamate-1-semialdehyde-2,1-aminomutase n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y7K0_ANEAE
Strain NCTC 7096 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIV58770.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneur
class III aminotransferase
Displaying 9 items

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