ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_UNK

Properties

Avg. coverage: 20.00 Longest contig: 23.13 Kbp Bin length: 22.48 Mbp GC content: 62.57 %

Contigs count: 10569 Features count: 30185 rRNAs count: 0 tRNAs count: 180

Genome completeness

megabin RP 35 / 55 MC: 32 BSCG 23 / 51 MC: 20 ASCG 38 / 38 MC: 38

Displaying items 10051-10100 of 10569 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_scaffold_123368 Phylum: Euryarchaeota (66.67%)	3	1485 bp	63.77	15.72	100.20
13_1_40cm_scaffold_124261 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1479 bp	63.56	26.30	100.20
13_1_40cm_scaffold_126777 Species: Methanosaeta concilii (50%)	2	1464 bp	51.71	4.97	100.21
13_1_40cm_scaffold_128142 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1455 bp	63.64	25.88	100.21
13_1_40cm_scaffold_240364 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1434 bp	66.46	27.83	100.21
13_1_40cm_scaffold_134168 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1419 bp	66.31	3.18	100.21
13_1_40cm_scaffold_134264 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	3	1419 bp	66.10	47.23	100.21
13_1_40cm_scaffold_259583 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1407 bp	62.76	7.67	100.21
13_1_40cm_scaffold_138502 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1395 bp	64.16	37.43	100.22
13_1_40cm_scaffold_270008 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1392 bp	64.80	44.54	100.22
13_1_40cm_scaffold_139480 Species: Methanofollis liminatans (50%)	2	1389 bp	64.15	8.67	100.22
13_1_40cm_scaffold_142382 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1374 bp	67.18	9.13	100.22
13_1_40cm_scaffold_83599 Genus: Methanosarcina (66.67%)	3	2745 bp	33.99	4.94	100.22
13_1_40cm_scaffold_143505 Species: Haloarcula californiae (50%)	2	1368 bp	52.34	2.75	100.22
13_1_40cm_scaffold_144097 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1365 bp	63.59	5.15	100.22
13_1_40cm_scaffold_84290 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1805 bp	70.36	7.23	100.22
13_1_40cm_scaffold_277114 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1344 bp	52.90	9.52	100.22
13_1_40cm_scaffold_148854 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1341 bp	68.61	5.80	100.22
13_1_40cm_scaffold_180521 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	4	2676 bp	66.67	7.79	100.22
13_1_40cm_scaffold_153423 Species: Methanocella arvoryzae (50%)	2	1317 bp	30.22	4.57	100.23
13_1_40cm_scaffold_155852 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1305 bp	68.12	23.47	100.23
13_1_40cm_scaffold_155969 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1305 bp	65.67	24.23	100.23
13_1_40cm_scaffold_156499 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1302 bp	72.35	40.10	100.23
13_1_40cm_scaffold_91026 Species: Archaeoglobus veneficus (50%)	2	1736 bp	49.48	7.95	100.23
13_1_40cm_scaffold_92364 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1724 bp	62.12	4.22	100.23
13_1_40cm_scaffold_234525 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1718 bp	61.47	26.88	100.23
13_1_40cm_scaffold_160409 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1284 bp	66.67	6.06	100.23
13_1_40cm_scaffold_161009 Species: Methanoregula boonei (50%)	2	1281 bp	59.25	3.72	100.23
13_1_40cm_scaffold_95276 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1697 bp	66.53	19.23	100.24
13_1_40cm_scaffold_164422 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1266 bp	72.67	26.77	100.24
13_1_40cm_scaffold_323725 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1257 bp	64.76	73.28	100.24
13_1_40cm_scaffold_98624 Species: Pyrococcus abyssi (50%)	2	1667 bp	50.39	6.63	100.24
13_1_40cm_scaffold_169080 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1245 bp	64.34	25.40	100.24
13_1_40cm_scaffold_169710 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1242 bp	47.67	5.25	100.24
13_1_40cm_scaffold_175131 Phylum: Euryarchaeota (66.67%)	3	2068 bp	62.43	9.59	100.24
13_1_40cm_scaffold_170530 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1239 bp	66.34	33.83	100.24
13_1_40cm_scaffold_170598 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1239 bp	66.34	29.37	100.24
13_1_40cm_scaffold_171797 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1233 bp	65.94	47.23	100.24
13_1_40cm_scaffold_172601 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1230 bp	64.47	9.18	100.24
13_1_40cm_scaffold_65249 Phylum: Euryarchaeota (100%)	3	2047 bp	53.15	4.66	100.24
13_1_40cm_scaffold_65585 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	2041 bp	62.47	6.76	100.25
13_1_40cm_scaffold_174530 Species: BJP_S1_SUB10_Methanoculleus_61_9 (50%)	2	1221 bp	72.32	4.93	100.25
13_1_40cm_scaffold_103402 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1628 bp	59.71	4.32	100.25
13_1_40cm_scaffold_174633 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1221 bp	66.50	34.95	100.25
13_1_40cm_scaffold_103741 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1625 bp	67.94	12.82	100.25
13_1_40cm_scaffold_176744 Species: Salinarchaeum sp. Harcht-Bsk1 (50%)	2	1212 bp	62.71	6.21	100.25
13_1_40cm_scaffold_176810 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1212 bp	67.99	8.91	100.25
13_1_40cm_scaffold_176824 Species: Methanococcoides methylutens (50%)	2	1212 bp	62.05	19.47	100.25
13_1_40cm_scaffold_176869 Species: Methanococcoides methylutens (50%)	2	1212 bp	61.30	7.25	100.25
13_1_40cm_scaffold_177367 Species: Methanosarcina sp. WWM596 (50%)	2	1209 bp	57.57	2.70	100.25

Displaying items 10051-10100 of 10569 in total

13_1_40CM_1_Euryarchaeota_megabin_63_20

13_1_40CM_1_Euryarchaeota_63_20

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_1_Euryarchaeota_megabin_63_20

13_1_40CM_1_Euryarchaeota_63_20

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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