ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_UNK

Properties

Avg. coverage: 20.00 Longest contig: 23.13 Kbp Bin length: 22.48 Mbp GC content: 62.57 %

Contigs count: 10569 Features count: 30185 rRNAs count: 0 tRNAs count: 180

Genome completeness

megabin RP 35 / 55 MC: 32 BSCG 23 / 51 MC: 20 ASCG 38 / 38 MC: 38

Displaying items 10101-10150 of 10569 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_scaffold_34182 Phylum: Euryarchaeota (100%)	3	2786 bp	64.00	17.66	100.25
13_1_40cm_scaffold_108906 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1586 bp	66.52	76.12	100.25
13_1_40cm_scaffold_182465 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1188 bp	63.89	10.14	100.25
13_1_40cm_scaffold_182468 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1188 bp	67.42	5.07	100.25
13_1_40cm_scaffold_184774 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1179 bp	64.63	25.76	100.25
13_1_40cm_scaffold_328687 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1176 bp	68.45	39.70	100.26
13_1_40cm_scaffold_88082 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	4	2349 bp	66.50	66.78	100.26
13_1_40cm_scaffold_186196 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1173 bp	64.36	5.78	100.26
13_1_40cm_scaffold_186141 Phylum: Euryarchaeota (66.67%)	3	1173 bp	67.86	12.84	100.26
13_1_40cm_scaffold_72494 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1945 bp	64.11	8.39	100.26
13_1_40cm_scaffold_188332 Species: Halorhabdus tiamatea (50%)	2	1164 bp	70.10	12.72	100.26
13_1_40cm_scaffold_189680 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1158 bp	65.89	7.37	100.26
13_1_40cm_scaffold_191814 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1149 bp	66.58	23.59	100.26
13_1_40cm_scaffold_55743 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	4	3821 bp	62.86	7.88	100.26
13_1_40cm_scaffold_324480 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1146 bp	67.02	19.49	100.26
13_1_40cm_scaffold_192466 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1146 bp	52.88	41.40	100.26
13_1_40cm_scaffold_192588 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1146 bp	64.92	5.91	100.26
13_1_40cm_scaffold_192599 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1146 bp	67.45	62.64	100.26
13_1_40cm_scaffold_37399 Phylum: Euryarchaeota (66.67%)	3	2672 bp	65.91	8.45	100.26
13_1_40cm_scaffold_193401 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1143 bp	68.50	20.86	100.26
13_1_40cm_scaffold_102821 Species: RBG_16_Euryarchaeota_68_13_curated (80%)	5	3034 bp	65.92	35.99	100.26
13_1_40cm_scaffold_194888 Species: Methanosarcina siciliae (50%)	2	1137 bp	54.97	28.70	100.26
13_1_40cm_scaffold_194891 Species: Methanosarcina siciliae (50%)	2	1137 bp	55.58	18.32	100.26
13_1_40cm_scaffold_195425 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1134 bp	64.55	57.77	100.27
13_1_40cm_scaffold_195581 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1134 bp	68.52	7.97	100.27
13_1_40cm_scaffold_195583 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1134 bp	69.14	6.86	100.27
13_1_40cm_scaffold_119505 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1511 bp	66.45	6.15	100.27
13_1_40cm_scaffold_181290 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1888 bp	64.04	49.99	100.27
13_1_40cm_scaffold_196128 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1131 bp	66.40	33.07	100.27
13_1_40cm_scaffold_196895 Species: Methanosarcina mazei (50%)	2	1128 bp	53.55	2.89	100.27
13_1_40cm_scaffold_197601 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1125 bp	68.27	26.77	100.27
13_1_40cm_scaffold_122231 Species: Methanothermococcus okinawensis (50%)	2	1493 bp	32.42	2.19	100.27
13_1_40cm_scaffold_245614 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1490 bp	64.16	34.20	100.27
13_1_40cm_scaffold_200533 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1113 bp	64.78	12.85	100.27
13_1_40cm_scaffold_123482 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1484 bp	63.21	21.14	100.27
13_1_40cm_scaffold_201355 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1110 bp	65.68	67.84	100.27
13_1_40cm_scaffold_202861 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1104 bp	66.49	24.55	100.27
13_1_40cm_scaffold_125865 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1469 bp	70.59	7.69	100.27
13_1_40cm_scaffold_56540 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	2190 bp	63.88	7.11	100.27
13_1_40cm_scaffold_205982 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1092 bp	65.75	15.40	100.28
13_1_40cm_scaffold_83797 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	3	1810 bp	61.88	11.23	100.28
13_1_40cm_scaffold_211975 Species: uncultured euryarchaeote Alv-FOS5 (50%)	2	1068 bp	59.93	16.22	100.28
13_1_40cm_scaffold_60030 Species: RBG_16_Euryarchaeota_41_19_curated (50%)	2	2130 bp	67.09	6.36	100.28
13_1_40cm_scaffold_217543 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1047 bp	65.52	14.14	100.29
13_1_40cm_scaffold_62645 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	2088 bp	65.71	77.18	100.29
13_1_40cm_scaffold_218955 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1041 bp	63.98	39.54	100.29
13_1_40cm_scaffold_354532 Species: Methanosarcina vacuolata (50%)	2	1385 bp	40.94	2.72	100.29
13_1_40cm_scaffold_219755 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	3	1038 bp	63.68	6.05	100.29
13_1_40cm_scaffold_265528 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1376 bp	63.30	20.98	100.29
13_1_40cm_scaffold_253088 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	1373 bp	66.42	18.46	100.29

Displaying items 10101-10150 of 10569 in total

13_1_40CM_1_Euryarchaeota_megabin_63_20

13_1_40CM_1_Euryarchaeota_63_20

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_1_Euryarchaeota_megabin_63_20

13_1_40CM_1_Euryarchaeota_63_20

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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