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13_1_40cm_2_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_11_1
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(3..710)
DNA (708bp) protein (236aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EXB5_9DELT
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=RBG_16_Planctomycetes_43_13_curated
electron transfer flavoprotein alpha-subunit
13_1_40cm_2_scaffold_11_2
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(817..1566)
DNA (750bp) protein (250aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XR44_9BACT
electron transfer flavoprotein subunit beta Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
electron transfer flavoprotein subunit beta
13_1_40cm_2_scaffold_11_3
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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1693..1983
DNA (291bp) protein (97aa)
Sec-independent protein translocase protein TatA n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5D2_9ARCH
sec-independent protein translocase protein TatA
Sec-independent protein translocase protein TatA {ECO:0000313|EMBL:BAJ47501.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidat
13_1_40cm_2_scaffold_11_4
unknown

Not on your lists

1998..2264
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_2_scaffold_11_5
RBG_16_Archaea_50_20_curated, Archaea

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2275..3165
DNA (891bp) protein (297aa)
Sec-independent protein translocase protein TatC n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5D1_9ARCH
Sec-independent protein secretion pathway component TatC; K03118 sec-independent protein translocase protein TatC Tax=RBG_16_Archaea_50_20_curated
sec-independent protein translocase protein TatC
13_1_40cm_2_scaffold_11_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3548..5131)
DNA (1584bp) protein (528aa)
Amidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISX8_KORVE
amidase
Amidase {ECO:0000313|EMBL:ABF40022.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (st
13_1_40cm_2_scaffold_11_7
unknown

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5217..5414
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_2_scaffold_11_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

5848..6702
DNA (855bp) protein (285aa)
purA; adenylosuccinate synthase (EC:6.3.4.4) Tax=RBG_13_Bathyarchaeota_38_9_curated
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUA8_9ARCH
13_1_40cm_2_scaffold_11_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(6683..7294)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI0003797EEE
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_11_10
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7433..8095)
DNA (663bp) protein (221aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=42256
2-phospho-L-lactate guanylyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGC4_9CHLR
2-phospho-L-lactate guanylyltransferase
13_1_40cm_2_scaffold_11_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8092..8982)
DNA (891bp) protein (297aa)
LPPG:FO 2-phospho-L-lactate transferase; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USE2_ROSS1
LPPG:FO 2-phospho-L-lactate transferase
13_1_40cm_2_scaffold_11_12
unknown

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comp(9085..9483)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_2_scaffold_11_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(9496..11322)
DNA (1827bp) protein (609aa)
glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8F2_9ARCH
glucosamine-fructose-6-phosphate aminotransferase Tax=RBG_16_Bathyarchaeota_48_13_curated
13_1_40cm_2_scaffold_11_14
unknown

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comp(11467..11925)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_2_scaffold_11_15
unknown

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comp(12029..12562)
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_40cm_2_scaffold_11_16
unknown

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comp(12948..13205)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_2_scaffold_11_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

13319..14062
DNA (744bp) protein (248aa)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_13_Bathyarchaeota_38_9_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NHZ5_METST
13_1_40cm_2_scaffold_11_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

14422..15471
DNA (1050bp) protein (350aa)
trpGD; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase (EC:4.1.3.27); K13497 anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18] Tax=RBG_16_Archaea_50
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S6M4_METSF
13_1_40cm_2_scaffold_11_19

Not on your lists

15475..16251
DNA (777bp) protein (259aa)
Indole-3-glycerol-phosphate synthase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B7L4_9ARCH
Marine sediment metagenome DNA, contig: S01H1_L08538 {ECO:0000313|EMBL:GAF92707.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
indole-3-glycerol phosphate synthase
13_1_40cm_2_scaffold_11_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

16248..17444
DNA (1197bp) protein (399aa)
trpB; tryptophan synthase subunit beta (EC:4.1.2.20) Tax=RBG_13_Bathyarchaeota_38_9_curated
trpB; tryptophan synthase subunit beta (EC:4.1.2.20)
Tryptophan synthase beta chain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBB0_NITGG
13_1_40cm_2_scaffold_11_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

17410..18255
DNA (846bp) protein (282aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20) Tax=RBG_16_Thaumarchaeota_49_8_curated
trpA; tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W630_UNCMA
13_1_40cm_2_scaffold_11_22

Not on your lists

comp(18257..18742)
DNA (486bp) protein (162aa)
AsnC family transcriptional regulator n=1 Tax=Nitrosopumilus sp. SJ RepID=UPI00037E27C7
Marine sediment metagenome DNA, contig: S01H1_L05582 {ECO:0000313|EMBL:GAF82676.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative HTH-type transcriptional regulator
13_1_40cm_2_scaffold_11_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18739..20475)
DNA (1737bp) protein (579aa)
Glutamyl-tRNA(Gln) amidotransferase transferase subunit (EC:6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Thermofilum sp. 1910b RepID=S5ZD67_9CREN
glutamyl-tRNA(Gln) amidotransferase Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_11_24
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(20644..21981)
DNA (1338bp) protein (446aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00037B0CDE
glutamyl-tRNA(Gln) amidotransferase subunit D
13_1_40cm_2_scaffold_11_25
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(22020..23615)
DNA (1596bp) protein (532aa)
ELP3; RNA polymerase II complex ELP3 subunit; K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Histone acetyltransferase, ELP3 family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH57_ACIB4
hypothetical protein
13_1_40cm_2_scaffold_11_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23628..24821)
DNA (1194bp) protein (398aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00038245FD
glycosyl transferase family 2 protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
family 2 glycosyl transferase
13_1_40cm_2_scaffold_11_27
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(25199..26032)
DNA (834bp) protein (278aa)
oxidoreductase FAD/NAD(P)-binding subunit id=14427356 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
oxidoreductase FAD/NAD(P)-binding subunit Tax=CSP1_1_Thaumarchaeota
oxidoreductase FAD/NAD(P)-binding subunit
13_1_40cm_2_scaffold_11_28
unknown

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comp(26312..26422)
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_2_scaffold_11_29
RBG_16_Archaea_50_20_curated, Archaea

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comp(26471..26851)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DII7_9EURY
Putative uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_11_30
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

26911..28464
DNA (1554bp) protein (518aa)
cysM1; putative cysteine synthase (EC:2.5.1.47)
Putative cysteine synthase {ECO:0000313|EMBL:AIC16006.1}; EC=2.5.1.47 {ECO:0000313|EMBL:AIC16006.1};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaerac
cysteine synthase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE2EF
Displaying items 1-30 of 56 in total

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