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13_1_40cm_2_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_112_1
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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1..1527
DNA (1527bp) protein (509aa)
Putative uncharacterized protein id=1250173 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
hypothetical protein
13_1_40cm_2_scaffold_112_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1611..2042
DNA (432bp) protein (144aa)
Putative thioredoxin n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKS7_NITGG
trxA4; thioredoxin
Putative thioredoxin {ECO:0000313|EMBL:AFU59953.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gar
13_1_40cm_2_scaffold_112_3
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(2094..2990)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003671A79
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_Bathyarchaeota_57_9_curated
ABC transporter-like protein
13_1_40cm_2_scaffold_112_4
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(2987..5782)
DNA (2796bp) protein (932aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI0003632D61
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
hypothetical protein
13_1_40cm_2_scaffold_112_5
unknown

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comp(5855..5953)
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_2_scaffold_112_6
unknown

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6221..6523
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_2_scaffold_112_7
unknown

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comp(6575..8182)
DNA (1608bp) protein (536aa)

This feature has no annotations

13_1_40cm_2_scaffold_112_8
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(8179..8934)
DNA (756bp) protein (252aa)
ABC transporter, ATP-binding protein, putative n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFC9_PYRYC
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein, putative {ECO:0000313|EMBL:AEH23736.1}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococc
13_1_40cm_2_scaffold_112_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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9100..10371
DNA (1272bp) protein (424aa)
putative dGTPase (EC:3.1.5.1)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI0003621E1D
metal dependent phosphohydrolase Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_2_scaffold_112_10
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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10462..10674
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:AJM92599.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.
13_1_40cm_2_scaffold_112_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(11029..11352)
DNA (324bp) protein (108aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_112_12
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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comp(11376..12158)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L688_KORCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB07967.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
13_1_40cm_2_scaffold_112_13
Sulfolobus solfataricus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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12261..12731
DNA (471bp) protein (157aa)
Ribosomal protein L11 methyltransferase, putative n=3 Tax=Sulfolobus solfataricus RepID=D0KSX0_SULS9
ribosomal protein L11 methyltransferase, putative
50S ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:AKA73902.1}; Putative uncharacterized protein ORF-c21_045 {ECO:0000313|EMBL:CAB57745.1}; TaxID=2287 species="Archaea; Crenarchaeota; Therm
13_1_40cm_2_scaffold_112_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(12723..13835)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L4Q8_THEU7
GTPase or GTP-binding protein; K06947 Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_112_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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14039..14719
DNA (681bp) protein (227aa)
DNA repair and recombination protein RadB n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E605_METEZ
DNA repair and recombination protein RadB Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA repair and recombination protein RadB
13_1_40cm_2_scaffold_112_16
RBG_16_Archaea_50_20_curated, Archaea

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14770..15258
DNA (489bp) protein (163aa)
Membrane protein containing DUF46 n=1 Tax=mine drainage metagenome RepID=T0YKS2_9ZZZZ
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_112_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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15324..16772
DNA (1449bp) protein (483aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK33_KORVE
peptidase U62, modulator of DNA gyrase; K03568 TldD protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
C69 family peptidase
13_1_40cm_2_scaffold_112_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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16775..18175
DNA (1401bp) protein (467aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK34_KORVE
peptidase U62, modulator of DNA gyrase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
C69 family peptidase
13_1_40cm_2_scaffold_112_19

Not on your lists

comp(18747..19889)
DNA (1143bp) protein (381aa)
Cystathionine gamma-lyase id=1251255 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria rbh
Cystathionine gamma-lyase {ECO:0000313|EMBL:EQB64118.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
cystathionine gamma-lyase
13_1_40cm_2_scaffold_112_20
unknown

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comp(20522..20980)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_2_scaffold_112_21
unknown

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comp(21140..21709)
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_40cm_2_scaffold_112_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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21793..22878
DNA (1086bp) protein (362aa)
pfkB family carbohydrate kinase (EC:2.7.1.-)
Sugar kinase, ribokinase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9G8_9EURY
Sugar kinase, ribokinase {ECO:0000313|EMBL:KCZ73245.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
13_1_40cm_2_scaffold_112_23
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

22979..23767
DNA (789bp) protein (263aa)
Beta-lactamase domain protein n=2 Tax=Candidatus Parvarchaeum acidiphilum RepID=D2EE80_9EURY
Beta-lactamase domain {ECO:0000313|EMBL:EGD71824.1}; TaxID=994837 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4_'5-way FS'.;"
bla; beta-lactamase
13_1_40cm_2_scaffold_112_24
Pyrobaculum islandicum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(23842..24477)
DNA (636bp) protein (212aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=384616 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrob
Superoxide dismutase n=1 Tax=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) RepID=A1RW25_PYRIL
superoxide dismutase
13_1_40cm_2_scaffold_112_25
unknown

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24583..25113
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_2_scaffold_112_26
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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25172..26572
DNA (1401bp) protein (467aa)
FeS cluster assembly protein SufB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9N0_NITGG
sufB; FeS cluster assembly protein SufB
FeS cluster assembly protein SufB {ECO:0000313|EMBL:AIC15476.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_2_scaffold_112_27
RBG_16_Archaea_50_20_curated, Archaea

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26657..28045
DNA (1389bp) protein (463aa)
sufD; FeS cluster assembly protein sufD Tax=RBG_16_Archaea_50_20_curated
sufD; FeS cluster assembly protein sufD
FeS assembly protein SufD id=14427023 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_2_scaffold_112_28
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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28141..28368
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037654EE
dioxygenase ferredoxin protein
Dioxygenase ferredoxin protein {ECO:0000313|EMBL:AFS82306.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus s
13_1_40cm_2_scaffold_112_29
GWA2_WOR_2_53_43_curated, WOR-2, Bacteria

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28430..29326
DNA (897bp) protein (299aa)
Putative uncharacterized protein id=4385671 bin=GWA2_OP3_53_43 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein Tax=GWA2_WOR_2_53_43_curated
hypothetical protein
13_1_40cm_2_scaffold_112_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

29443..29979
DNA (537bp) protein (179aa)
Putative transcriptional regulator, ArsR family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICL3_NITGG
arsR family transcriptional regulator
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:AFU57360.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
Displaying items 1-30 of 41 in total

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