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13_1_40cm_2_scaffold_1293

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1293_1
unknown

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2..649
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_2_scaffold_1293_2
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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756..2168
DNA (1413bp) protein (471aa)
Tetratricopeptide repeat protein id=3965264 bin=GWF2_Ignavibacteria_35_20 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
TPR repeat-containing protein Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
hypothetical protein
13_1_40cm_2_scaffold_1293_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2165..3451)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R8A2_PIRSD
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_40cm_2_scaffold_1293_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

3463..5388
DNA (1926bp) protein (642aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI0003699347
PKD domain containing protein
DNA polymerase III subunit alpha Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_2_scaffold_1293_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5342..5890)
DNA (549bp) protein (183aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_1293_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5890..6243)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RFG8_MYCXE
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_1293_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6266..7510)
DNA (1245bp) protein (415aa)
Beta-lactamase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJA7_KORVE
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AHG93328.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1293_8
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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7594..8583
DNA (990bp) protein (330aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Desmospora sp. 8437 RepID=F5SBF1_9BACL
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA
13_1_40cm_2_scaffold_1293_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8635..9354
DNA (720bp) protein (240aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A656_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88322.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1293_10

Not on your lists

9422..11311
DNA (1890bp) protein (630aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6A155
Uncharacterized protein {ECO:0000313|EMBL:AHN97873.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
hypothetical protein
13_1_40cm_2_scaffold_1293_11

Not on your lists

11308..11790
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6A155
Uncharacterized protein {ECO:0000313|EMBL:AHN97873.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
hypothetical protein
13_1_40cm_2_scaffold_1293_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11787..12821
DNA (1035bp) protein (345aa)
surface antigen
surface antigen id=24659098 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Surface antigen, putative {ECO:0000313|EMBL:ABC44983.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
13_1_40cm_2_scaffold_1293_13

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12839..14563
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003639826 rbh
FG-GAP repeat-containing protein {ECO:0000313|EMBL:AHN97875.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
FG-GAP repeat domain-containing protein
13_1_40cm_2_scaffold_1293_14
unknown

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14618..14812
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_2_scaffold_1293_15
unknown

Not on your lists

14902..15345
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_2_scaffold_1293_16

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comp(15287..15895)
DNA (609bp) protein (203aa)
Marine sediment metagenome DNA, contig: S01H4_L05693 {ECO:0000313|EMBL:GAG85163.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_2_scaffold_1293_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16004..16381)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035E6308
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AHG91609.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1293_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16393..18132)
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037FCAF6
PQQ-dependent dehydrogenase, methanol/ethanol family
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:AHG91607.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1293_19
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18256..19389
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9S1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFK07512.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
putative 3-carboxymuconate cyclase
13_1_40cm_2_scaffold_1293_20
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19446..20858)
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIF2_MOOTA
sensor signal transduction histidine kinase
13_1_40cm_2_scaffold_1293_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(20851..21534)
DNA (684bp) protein (228aa)
DNA-binding response regulator in two-component system with YedV n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEX8_9CHLR
two component transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
13_1_40cm_2_scaffold_1293_22
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22091..22642
DNA (552bp) protein (184aa)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase id=14425745 bin=bin1_lowGC species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
msrAB; peptide methionine sulfoxide reductase MsrAB Tax=RBG_16_Deltaproteobacteria_47_11_curated
Peptide methionine sulfoxide reductase msrB
13_1_40cm_2_scaffold_1293_23
unknown

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comp(22673..22924)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_2_scaffold_1293_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23191..25677
DNA (2487bp) protein (829aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1293_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(25674..26345)
DNA (672bp) protein (224aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH21_9BACT
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas met
HAD family hydrolase
13_1_40cm_2_scaffold_1293_26
Bacillus sp., Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26509..27945)
DNA (1437bp) protein (479aa)
SprB n=2 Tax=Bacillus sp. RepID=Q45464_BACSP
SprB {ECO:0000313|EMBL:AAC43578.1}; TaxID=1409 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp.;"
subtilisin-like serine protease
13_1_40cm_2_scaffold_1293_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28057..28302)
DNA (246bp) protein (82aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_1293_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28299..29312)
DNA (1014bp) protein (338aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
2-oxoglutarate ferredoxin oxidoreductase beta subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX70_9BACT
2-oxoglutarate ferredoxin oxidoreductase subunit beta
13_1_40cm_2_scaffold_1293_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(29309..31102)
DNA (1794bp) protein (598aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX69_9BACT
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
13_1_40cm_2_scaffold_1293_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(31112..32035)
DNA (924bp) protein (308aa)
L-proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Proline dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV36_9BACT id=5223515 bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative proline dehydrogenase
Displaying items 1-30 of 33 in total

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