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13_1_40cm_2_scaffold_172

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_172_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2..286
DNA (285bp) protein (95aa)
30S ribosomal protein S3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS3_GEMAT
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Gemmatimonadetes_66_8_curated
ribosomal protein S3
13_1_40cm_2_scaffold_172_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


296..709
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL16_GEMAT
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L16
13_1_40cm_2_scaffold_172_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


711..911
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0003778E91
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpmC; 50S ribosomal protein L29
13_1_40cm_2_scaffold_172_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


908..1156
DNA (249bp) protein (83aa)
30S ribosomal protein S17 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R4_GEMAT
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal protein S17
13_1_40cm_2_scaffold_172_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


1176..1541
DNA (366bp) protein (122aa)
50S ribosomal protein L14 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL14_GEMAT
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein L14
13_1_40cm_2_scaffold_172_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


1543..1929
DNA (387bp) protein (129aa)
50S ribosomal protein L24 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R6_GEMAT
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein L24
13_1_40cm_2_scaffold_172_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


1937..2719
DNA (783bp) protein (261aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal protein L5
50S ribosomal protein L5 id=4034737 bin=GWC2_Nitrospirae_57_13 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
13_1_40cm_2_scaffold_172_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2731..2916
DNA (186bp) protein (62aa)
30S ribosomal protein S14 n=1 Tax=candidate division WS3 bacterium JGI 0000059-A10 RepID=UPI00035C48FC
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_2_scaffold_172_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


2933..3328
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R9_GEMAT
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpsH; 30S ribosomal protein S8
13_1_40cm_2_scaffold_172_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


3335..3880
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL6_GEMAT
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=GWC2_Gemmatimonadetes_71_10_curated
Ribosomal protein L6, subgroup
13_1_40cm_2_scaffold_172_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3884..4255
DNA (372bp) protein (124aa)
50S ribosomal protein L18 n=4 Tax=Paenibacillus RepID=F8FA30_PAEMK id=5223098 bin=16ft_combo_ws3_JS1 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=GWC2_Gemmatimonadetes_71_10_curated
ribosomal protein L18
13_1_40cm_2_scaffold_172_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


4255..4995
DNA (741bp) protein (247aa)
30S ribosomal protein S5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S2_GEMAT
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=GWC2_Gemmatimonadetes_71_10_curated
rpsE; 30S ribosomal protein S5
13_1_40cm_2_scaffold_172_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


4988..5254
DNA (267bp) protein (89aa)
50S ribosomal protein L30 n=1 Tax=Prevotella sp. CAG:1031 RepID=R5AVG4_9BACT
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ribosomal protein L30
13_1_40cm_2_scaffold_172_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


5259..5816
DNA (558bp) protein (186aa)
50S ribosomal protein L15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S4_GEMAT
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplO; 50S ribosomal protein L15
13_1_40cm_2_scaffold_172_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


5820..7139
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S5_GEMAT
secY; preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein translocase subunit SecY
13_1_40cm_2_scaffold_172_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7143..7706
DNA (564bp) protein (188aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Leptospira sp. B5-022 RepID=M6DBZ1_9LEPT
13_1_40cm_2_scaffold_172_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7703..8464
DNA (762bp) protein (254aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Methionine aminopeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S7_GEMAT
methionine aminopeptidase, type I
13_1_40cm_2_scaffold_172_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8448..9902)
DNA (1455bp) protein (485aa)
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Formiminotransferase-cyclodeaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T1_GEMAT
13_1_40cm_2_scaffold_172_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9902..10690)
DNA (789bp) protein (263aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Myo-inositol-1(Or 4)-monophosphatase n=2 Tax=Coxiella burnetii RepID=Q83CI2_COXBU
inositol monophosphatase
13_1_40cm_2_scaffold_172_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10730..11728
DNA (999bp) protein (333aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Tryptophan--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T3_GEMAT
Tryptophan-tRNA ligase, bacterial-type
13_1_40cm_2_scaffold_172_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11728..12399
DNA (672bp) protein (224aa)
MgtC family magnesium (Mg2+) transporter n=1 Tax=Desmospora sp. 8437 RepID=F5SI62_9BACL
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MgtC/SapB transporter
13_1_40cm_2_scaffold_172_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13246..13365
DNA (120bp) protein (40aa)
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_2_scaffold_172_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13365..14543
DNA (1179bp) protein (393aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T5_GEMAT
pilT; twitching mobility protein Tax=GWC2_Gemmatimonadetes_71_10_curated
twitching motility protein
13_1_40cm_2_scaffold_172_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14540..15427
DNA (888bp) protein (296aa)
Putative dihydrodipicolinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T6_GEMAT
putative dihydrodipicolinate synthetase Tax=RBG_16_Gemmatimonadetes_66_8_curated
dihydrodipicolinate synthetase
13_1_40cm_2_scaffold_172_25
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15424..16308
DNA (885bp) protein (295aa)
Putative M28-family peptidase n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3EB57_9ACTO
Putative M28-family peptidase {ECO:0000313|EMBL:EMF30937.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 1
13_1_40cm_2_scaffold_172_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16475..17755
DNA (1281bp) protein (427aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T9_GEMAT
13_1_40cm_2_scaffold_172_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17752..20109
DNA (2358bp) protein (786aa)
penicillin amidase; K01434 penicillin amidase [EC:3.5.1.11] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glr1988 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NJ44_GLOVI
penicillin amidase
13_1_40cm_2_scaffold_172_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20109..21110
DNA (1002bp) protein (334aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U0_GEMAT
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA {ECO:0000313|EMBL:AHG90345.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_172_29
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

21430..22512
DNA (1083bp) protein (361aa)
glycerate kinase (EC:2.7.1.31); K00865 glycerate kinase [EC:2.7.1.31] Tax=GWA2_Elusimicrobia_69_24_curated
glycerate kinase (EC:2.7.1.31)
Glycerate kinase family protein id=2311409 bin=GWA2_Elusimicrobia_69_24 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_40cm_2_scaffold_172_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


22538..23875
DNA (1338bp) protein (446aa)
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRC9_9BACT rbh
Displaying items 1-30 of 45 in total

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