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13_1_40cm_2_scaffold_19081

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_19081_1
unknown

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1..66
DNA (66bp) protein (22aa)

This feature has no annotations

13_1_40cm_2_scaffold_19081_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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66..806
DNA (741bp) protein (247aa)
30S ribosomal protein S5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S2_GEMAT
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=GWC2_Gemmatimonadetes_71_10_curated
ribosomal protein S5
13_1_40cm_2_scaffold_19081_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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799..1089
DNA (291bp) protein (97aa)
50S ribosomal protein L30 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S3_GEMAT
ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|SAAS:SAAS00082687}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_19081_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1091..1615
DNA (525bp) protein (175aa)
50S ribosomal protein L15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S4_GEMAT
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplO; 50S ribosomal protein L15
13_1_40cm_2_scaffold_19081_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1612..2931
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S5_GEMAT
secY; preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein translocase subunit SecY
13_1_40cm_2_scaffold_19081_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2946..3509
DNA (564bp) protein (188aa)
adenylate kinase family protein (EC:2.7.4.3) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Adenylate kinase n=1 Tax=Leptospira sp. B5-022 RepID=M6DBZ1_9LEPT
adenylate kinase
13_1_40cm_2_scaffold_19081_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3506..4261
DNA (756bp) protein (252aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Methionine aminopeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S7_GEMAT
methionine aminopeptidase, type I
13_1_40cm_2_scaffold_19081_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(4269..5705)
DNA (1437bp) protein (479aa)
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Formiminotransferase-cyclodeaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T1_GEMAT
13_1_40cm_2_scaffold_19081_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5705..6502)
DNA (798bp) protein (266aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GSX1_9GAMM
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
13_1_40cm_2_scaffold_19081_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6514..7503
DNA (990bp) protein (330aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Tryptophan--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T3_GEMAT
Tryptophan-tRNA ligase, bacterial-type
13_1_40cm_2_scaffold_19081_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7511..8179
DNA (669bp) protein (223aa)
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein id=17020259 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
MgtC/SapB transporter
13_1_40cm_2_scaffold_19081_12
unknown

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8286..8969
DNA (684bp) protein (228aa)

This feature has no annotations

13_1_40cm_2_scaffold_19081_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9166..10323
DNA (1158bp) protein (386aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T5_GEMAT
pilT; twitching mobility protein Tax=GWC2_Gemmatimonadetes_71_10_curated
twitching motility protein
13_1_40cm_2_scaffold_19081_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10320..11216
DNA (897bp) protein (299aa)
Putative dihydrodipicolinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T6_GEMAT
putative dihydrodipicolinate synthetase Tax=RBG_16_Gemmatimonadetes_66_8_curated
dihydrodipicolinate synthetase
13_1_40cm_2_scaffold_19081_15
unknown

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11209..12135
DNA (927bp) protein (309aa)

This feature has no annotations

13_1_40cm_2_scaffold_19081_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12210..13496
DNA (1287bp) protein (429aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T9_GEMAT
13_1_40cm_2_scaffold_19081_17
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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13613..13972
DNA (360bp) protein (120aa)
S23 ribosomal protein Tax=RBG_16_Planctomycetes_55_9_curated
23Sr RNA gene
Putative uncharacterized protein id=3889216 bin=GWF2_Bacteroidetes_49_14 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
13_1_40cm_2_scaffold_19081_18
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

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15125..15424
DNA (300bp) protein (100aa)
glycerate kinase (EC:2.7.1.31); K00865 glycerate kinase [EC:2.7.1.31] Tax=GWF2_Elusimicrobia_62_30_curated
Glycerate kinase id=2323522 bin=GWA2_Elusi_like_61_42 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
13_1_40cm_2_scaffold_19081_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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15465..16802
DNA (1338bp) protein (446aa)
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRC9_9BACT
13_1_40cm_2_scaffold_19081_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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16799..17089
DNA (291bp) protein (97aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_19081_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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17100..18806
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003741AB7
amine oxidase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
amine oxidase
Displaying 21 items

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