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13_1_40cm_2_scaffold_201

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_201_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


2..355
DNA (354bp) protein (118aa)
30S ribosomal protein S8 n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAP1_9CREN
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S8P
13_1_40cm_2_scaffold_201_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


365..943
DNA (579bp) protein (193aa)
50S ribosomal protein L6 n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9S0_STAHD
50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6 Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L6P
13_1_40cm_2_scaffold_201_3
Thermoproteus uzoniensis, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

945..1466
DNA (522bp) protein (174aa)
50S ribosomal protein L32e n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L315_THEU7
50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000256|HAMAP-Rule:MF_00810}; TaxID=999630 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus uzon
13_1_40cm_2_scaffold_201_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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1463..1891
DNA (429bp) protein (143aa)
50S ribosomal protein L19e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD7_METFV
LSU ribosomal protein l19e; K02885 large subunit ribosomal protein L19e Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L19e
13_1_40cm_2_scaffold_201_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


1895..2494
DNA (600bp) protein (200aa)
50S ribosomal protein L18P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD8_METFV
rpl18p; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L18
13_1_40cm_2_scaffold_201_6
unknown

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2491..2655
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_2_scaffold_201_7
unknown

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comp(2669..2893)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_2_scaffold_201_8
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


3192..3587
DNA (396bp) protein (132aa)
50S ribosomal protein L30P n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJN6_PYRSN
50S ribosomal protein L30P
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" s
13_1_40cm_2_scaffold_201_9
Desulfurococcus fermentans, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

3731..4183
DNA (453bp) protein (151aa)
Small heat shock protein HSP20 n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XSD3_9CREN
small heat shock protein HSP20
Small heat shock protein HSP20 {ECO:0000313|EMBL:AFL66857.1}; TaxID=768672 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus.;" source="Desulfurococ
13_1_40cm_2_scaffold_201_10
unknown

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comp(4459..5685)
DNA (1227bp) protein (409aa)

This feature has no annotations

13_1_40cm_2_scaffold_201_11
unknown

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5734..5985
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_2_scaffold_201_12

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6363..6854
DNA (492bp) protein (164aa)
Putative dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=uncultured archaeon RepID=I3RKT2_9ARCH
Putative dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AFK24942.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
cupin
13_1_40cm_2_scaffold_201_13
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

6916..7917
DNA (1002bp) protein (334aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Thermococcus sp. AM4 RepID=B7R2B1_9EURY
dTDP-D-glucose 4,6-dehydratase
dTDP-D-glucose 4,6-dehydratase {ECO:0000313|EMBL:AHL23096.1}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;
13_1_40cm_2_scaffold_201_14
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

7921..8814
DNA (894bp) protein (298aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S220_FERPA
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AIY90164.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivoran
13_1_40cm_2_scaffold_201_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8856..9923)
DNA (1068bp) protein (356aa)
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_13_Bathyarchaeota_38_9_curated
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidyltransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D556_METSW
13_1_40cm_2_scaffold_201_16
uncultured marine crenarchaeote E6-3G, Crenarchaeota, Archaea

Not on your lists

10092..11549
DNA (1458bp) protein (486aa)
Glycosyltransferase n=1 Tax=uncultured marine crenarchaeote E6-3G RepID=G9BAK9_9CREN
Glycosyltransferase {ECO:0000313|EMBL:ADP09425.1}; TaxID=907719 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured marine crenarchaeote E6-
putative glycosyltransferase
13_1_40cm_2_scaffold_201_17
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

11755..12555
DNA (801bp) protein (267aa)
Glycosyltransferase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CY85_9ARCH
glycosyl transferase family protein
Glycosyltransferase {ECO:0000313|EMBL:EGP92863.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum
13_1_40cm_2_scaffold_201_18
unknown

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12813..14906
DNA (2094bp) protein (698aa)

This feature has no annotations

13_1_40cm_2_scaffold_201_19
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(14948..16060)
DNA (1113bp) protein (371aa)
Glycosyl transferase family 2 n=1 Tax=bacterium Ellin514 RepID=B9XD38_9BACT id=13908 bin=ACD18 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
glycosyl transferase family protein; K07011 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
family 2 glycosyl transferase
13_1_40cm_2_scaffold_201_20
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(16057..17133)
DNA (1077bp) protein (359aa)
Glycosyl transferase family 2 n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EGF8_CHLL2
glycosyl transferase family protein; K07011 Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
family 2 glycosyl transferase
13_1_40cm_2_scaffold_201_21

Not on your lists

comp(17188..18360)
DNA (1173bp) protein (391aa)
Lipopolysaccharide transferase family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NEA8_9EURY
hypothetical protein
Marine sediment metagenome DNA, contig: S03H2_C03571 {ECO:0000313|EMBL:GAH25047.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_2_scaffold_201_22
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(18482..19420)
DNA (939bp) protein (313aa)
GHMP kinase, N-terminal domain protein n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L027_9BACT
GHMP kinase, N-terminal domain protein {ECO:0000313|EMBL:EFD25638.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum
kinase, galactokinase/mevalonate kinase
13_1_40cm_2_scaffold_201_23
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19507..20097)
DNA (591bp) protein (197aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibr
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GBQ7_DESGI
putative D,D-heptose 1,7-bisphosphate phosphatase
13_1_40cm_2_scaffold_201_24
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(20090..20725)
DNA (636bp) protein (212aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isom
Phosphoheptose isomerase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ACV3_THEID
phosphoheptose isomerase
13_1_40cm_2_scaffold_201_25
unknown

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comp(21898..22221)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_2_scaffold_201_26
unknown

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22414..22650
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_2_scaffold_201_27
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22791..23441)
DNA (651bp) protein (217aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AKB34403.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AKB34403.1};; TaxID=1434119 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae;
dTDP-glucose 4,6-dehydratase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DD0_METBF
13_1_40cm_2_scaffold_201_28
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(23431..23625)
DNA (195bp) protein (65aa)
NDP-sugar epimerase n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97CP3_THEVO
UDP-glucose 4-epimerase
NDP-sugar epimerase {ECO:0000313|EMBL:BAB59200.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (
13_1_40cm_2_scaffold_201_29
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23988..26291
DNA (2304bp) protein (768aa)
Transporter n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y025_9EURY
Transporter {ECO:0000313|EMBL:ELY67052.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
transporter
13_1_40cm_2_scaffold_201_30
unknown

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26610..26816
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 30 items

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