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13_1_40cm_2_scaffold_2232

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2232_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20..1138)
DNA (1119bp) protein (373aa)
hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81] id=12554194 bin=CNBR_ACIDO species=Halopiger xanaduensis genus=Halopiger taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
hydroxypyruvate reductase (EC:1.1.1.81)
13_1_40cm_2_scaffold_2232_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1297..1581)
DNA (285bp) protein (95aa)
id=12554195 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
id=12554195 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_2_scaffold_2232_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1671..2555)
DNA (885bp) protein (295aa)
Cell division protein FtsX n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL6_9BACT
Cell division protein FtsX Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Cell division protein FtsX
13_1_40cm_2_scaffold_2232_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2708..3367)
DNA (660bp) protein (220aa)
Cell division ATP-binding protein FtsE n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSL6_9CLOT
cell division ATP-binding protein FtsE Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cell division ATP-binding protein FtsE
13_1_40cm_2_scaffold_2232_5
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

3521..5521
DNA (2001bp) protein (667aa)
serine/threonine protein kinase Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
serine/threonine protein kinase id=16959103 bin=RBG_16_Aminicenantes_63_14 tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
serine/threonine protein kinase
13_1_40cm_2_scaffold_2232_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5443..5658)
DNA (216bp) protein (72aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curat
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3SFB5_9PROT
aspartyl/glutamyl-tRNA amidotransferase subunit B
13_1_40cm_2_scaffold_2232_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5604..6821)
DNA (1218bp) protein (406aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Acidobact
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=12554196 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
13_1_40cm_2_scaffold_2232_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6821..8410)
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003481D01 rbh
phosphoenolpyruvate carboxykinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphoenolpyruvate carboxykinase
13_1_40cm_2_scaffold_2232_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

8526..9218
DNA (693bp) protein (231aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12554198 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_2_scaffold_2232_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

9215..9847
DNA (633bp) protein (211aa)
id=12554199 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_2_scaffold_2232_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

10023..11195
DNA (1173bp) protein (391aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=12554200 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2)
13_1_40cm_2_scaffold_2232_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(11192..11449)
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_2_scaffold_2232_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11560..11868
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036E1421
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_2_scaffold_2232_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

11987..12454
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034510A6
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_2_scaffold_2232_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12451..14196
DNA (1746bp) protein (582aa)
outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
outer membrane protein id=12554202 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
outer membrane protein
13_1_40cm_2_scaffold_2232_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14198..15202
DNA (1005bp) protein (335aa)
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
macA; acrolide-specific efflux protein MacA id=12554203 bin=CNBR_ACIDO species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
macA; acrolide-specific efflux protein MacA
13_1_40cm_2_scaffold_2232_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15141..15461
DNA (321bp) protein (107aa)
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
macA; acrolide-specific efflux protein MacA id=12554203 bin=CNBR_ACIDO species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secretion protein hlyd
13_1_40cm_2_scaffold_2232_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15508..18612
DNA (3105bp) protein (1035aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12554204 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
acriflavin resistance protein
13_1_40cm_2_scaffold_2232_19
RBG_16_Aminicenantes_63_16_plus, RBG_16_Aminicenantes_63_16_plus, RBG_16_Aminicenantes_63_16_plus, RBG_16_Aminicenantes_63_16_plus, Aminicenantes, Bacteria

Not on your lists

comp(18870..19808)
DNA (939bp) protein (313aa)
id=16828964 bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
id=16828964 bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
13_1_40cm_2_scaffold_2232_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

20149..20607
DNA (459bp) protein (153aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_2_scaffold_2232_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20717..21469
DNA (753bp) protein (251aa)
ybbA; transporter subunit: ATP-binding component of ABC superfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC-type antimicrobial peptide transport system,ATPase component id=12554206 bin=CNBR_ACIDO species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
ybbA; transporter subunit: ATP-binding component of ABC superfamily
13_1_40cm_2_scaffold_2232_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

21559..22905
DNA (1347bp) protein (449aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein; K02004 putative ABC transport system permease protein id=12554207 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
multidrug ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_2232_23
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22909..24090
DNA (1182bp) protein (394aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G433_GEOUR
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABQ26551.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source=
13_1_40cm_2_scaffold_2232_24
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24056..24358)
DNA (303bp) protein (101aa)
UPI0003D61277 related cluster n=1 Tax=unknown RepID=UPI0003D61277
Uncharacterised protein {ECO:0000313|EMBL:CRE16023.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
13_1_40cm_2_scaffold_2232_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

24593..27160
DNA (2568bp) protein (856aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14623092 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
acriflavin resistance protein
13_1_40cm_2_scaffold_2232_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

27414..27899
DNA (486bp) protein (162aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
RNA polymerase ECF-type sigma factor
13_1_40cm_2_scaffold_2232_27
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

27900..28646
DNA (747bp) protein (249aa)
hypothetical protein id=8266373 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_2_scaffold_2232_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

28680..29822
DNA (1143bp) protein (381aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein id=8266372 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Displaying 28 items

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