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13_1_40cm_2_scaffold_328

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_328_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..1597
DNA (1596bp) protein (532aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4344626 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_328_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1587..2969)
DNA (1383bp) protein (461aa)
phosphodiesterase/alkaline phosphatase D; K01113 alkaline phosphatase D [EC:3.1.3.1] id=14625882 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
phosphodiesterase/alkaline phosphatase D; K01113 alkaline phosphatase D [EC:3.1.3.1] Tax=CSP1_6_Rokubacteria
glycerophosphoryl diester phosphodiesterase
13_1_40cm_2_scaffold_328_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2972..4342)
DNA (1371bp) protein (457aa)
phosphodiesterase/alkaline phosphatase D; K01113 alkaline phosphatase D [EC:3.1.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phosphodiesterase/alkaline phosphatase D; K01113 alkaline phosphatase D [EC:3.1.3.1] id=14625882 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glycerophosphoryl diester phosphodiesterase
13_1_40cm_2_scaffold_328_4
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4332..5048)
DNA (717bp) protein (239aa)
Peptidase MA superfamily n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IGD0_9FIRM
Peptidase MA superfamily {ECO:0000313|EMBL:EQB24901.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
13_1_40cm_2_scaffold_328_5
unknown

Not on your lists

5175..5336
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_2_scaffold_328_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5338..6249)
DNA (912bp) protein (304aa)
dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dehydrogenase id=14625874 bin=bin7_NC10_sister species=Bacillus isronensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
dehydrogenase
13_1_40cm_2_scaffold_328_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6423..7220)
DNA (798bp) protein (266aa)
hypothetical protein; K07058 membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative membrane protein id=4969016 bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ribonuclease BN
13_1_40cm_2_scaffold_328_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7227..8006)
DNA (780bp) protein (260aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=14625871 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10 rbh
short-chain dehydrogenase/reductase SDR
13_1_40cm_2_scaffold_328_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8026..8877)
DNA (852bp) protein (284aa)
dienelactone hydrolase (EC:3.1.1.-)
dienelactone hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Dienelactone hydrolase id=4969018 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_328_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9013..9522
DNA (510bp) protein (170aa)
Putative uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3909996 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DSBA oxidoreductase
13_1_40cm_2_scaffold_328_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9666..11759
DNA (2094bp) protein (698aa)
DNA polymerase II Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA polymerase id=4969020 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA polymerase II
13_1_40cm_2_scaffold_328_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11825..12166)
DNA (342bp) protein (114aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNP-1 like RNA-binding protein id=4969022 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNP-1 like RNA-binding protein
13_1_40cm_2_scaffold_328_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12283..13077)
DNA (795bp) protein (265aa)
hypothetical protein; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR id=4969023 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_328_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13077..13640)
DNA (564bp) protein (188aa)
hypothetical protein; K09763 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4969024 bin=GWA2_Methylomirabilis_73_35 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_328_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

13739..15382
DNA (1644bp) protein (548aa)
molybdopterin-guanine dinucleotide biosynthesis protein B; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Molybdenum cofactor synthesis domain protein id=3926923 bin=GWC2_Methylomirabilis_70_16 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdenum cofactor biosynthesis protein MoaA
13_1_40cm_2_scaffold_328_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15375..16949
DNA (1575bp) protein (525aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627421 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_328_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

16966..17220
DNA (255bp) protein (85aa)
UPF0176 protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
UPF0176 protein id=3926920 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_328_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

17378..18121
DNA (744bp) protein (248aa)
id=14627849 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
13_1_40cm_2_scaffold_328_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18076..18882
DNA (807bp) protein (269aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14627849 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_328_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18882..19796
DNA (915bp) protein (305aa)
transketolase, N-terminal subunit; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] id=14627850 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
transketolase (EC:2.2.1.1)
13_1_40cm_2_scaffold_328_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19806..20054
DNA (249bp) protein (83aa)
hypothetical protein; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transketolase; K00615 transketolase [EC:2.2.1.1] id=14627851 bin=bin7_NC10_sister species=Anaeromusa acidaminophila genus=Anaeromusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Displaying 21 items

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