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13_1_40cm_2_scaffold_439

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_439_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2..604)
DNA (603bp) protein (201aa)
DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RBG_16_Archaea_50_20_curated
DNA topoisomerase 1 n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=TOP1_PYRAB
topA; DNA topoisomerase I
13_1_40cm_2_scaffold_439_2
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1231..2550
DNA (1320bp) protein (440aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1; Short=BPG-independent PGAM 1;; Short=Phosphoglyceromutase 1;; Short=aPGAM 1;; EC=5.4.2.12;; TaxID=187420 species="Archaea; Euryarchaeota;
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=APGM1_METTH
13_1_40cm_2_scaffold_439_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(2608..3978)
DNA (1371bp) protein (457aa)
sun protein (fmu protein); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_46_16b_curated
tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TGY3_METKA
tRNA/rRNA cytosine-C5-methylase
13_1_40cm_2_scaffold_439_4
RBG_16_Archaea_50_20_curated, Archaea

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3982..6564
DNA (2583bp) protein (861aa)
DNA polymerase I (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERA4_9CREN
13_1_40cm_2_scaffold_439_5
RBG_16_Archaea_50_20_curated, Archaea

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6572..7321
DNA (750bp) protein (250aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
F420-dependent oxidoreductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDA3_THET1
F420-dependent oxidoreductase
13_1_40cm_2_scaffold_439_6
RBG_16_Archaea_50_20_curated, Archaea

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7396..8103
DNA (708bp) protein (236aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_439_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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8160..9224
DNA (1065bp) protein (355aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_13_Bathyarchaeota_38_9_curated
myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E6K4_9FIRM
13_1_40cm_2_scaffold_439_8
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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9221..10003
DNA (783bp) protein (261aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RBG_16_Thaumarchaeota_49_8_curated
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP18_NITGG
13_1_40cm_2_scaffold_439_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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10258..10587
DNA (330bp) protein (110aa)
30S ribosomal protein S25e n=3 Tax=Sulfolobus acidocaldarius RepID=M1IBE2_9CREN
30S ribosomal protein S25 Tax=RBG_13_Bathyarchaeota_38_9_curated
30S ribosomal protein S25e
13_1_40cm_2_scaffold_439_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(10584..10970)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B992_METTP
hypothetical protein; K09143 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_2_scaffold_439_11
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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11040..12353
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMI9_THEBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADT83968.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (stra
13_1_40cm_2_scaffold_439_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12370..13491)
DNA (1122bp) protein (374aa)
Putative aminotransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ6_METPS
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Tax=RBG_13_Bathyarchaeota_38_9_curated
putative aminotransferase
13_1_40cm_2_scaffold_439_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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13780..15495
DNA (1716bp) protein (572aa)
Thermosome subunit n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9L4_9ARCH
thsA4; archaeal thermosome Tax=RBG_13_Bathyarchaeota_38_9_curated
thsA; archaeal thermosome
13_1_40cm_2_scaffold_439_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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15467..15787
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase, subunit K/omega (EC:2.7.7.6); K03014 DNA-directed RNA polymerases I, II, and III subunit RPABC2 Tax=RBG_13_Bathyarchaeota_38_9_curated
Putative RNA polymerase Rpb6 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6C9 RepID=B3T8Y5_9ARCH
RNA polymerase Rpb6
13_1_40cm_2_scaffold_439_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(16041..16529)
DNA (489bp) protein (163aa)
Acetyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU7_9CREN
ribosomal-protein-alanine acetyltransferase Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S18P alanine acetyltransferase
13_1_40cm_2_scaffold_439_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

16661..17881
DNA (1221bp) protein (407aa)
Putative peptidase family M50 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6D3 RepID=B3T900_9ARCH
peptidase M50 Tax=RBG_16_Archaea_50_20_curated
membrane-associated Zn-dependent protease
13_1_40cm_2_scaffold_439_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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17892..18602
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8A9D3_IGNH4
Restriction endonuclease family protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_2_scaffold_439_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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18618..19457
DNA (840bp) protein (280aa)
3-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Caldanaerobacter subterraneus RepID=U5CPL6_THEYO
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KKC30380.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="C
3-hydroxyacyl-CoA dehydrogenase
13_1_40cm_2_scaffold_439_19

Not on your lists

19447..20103
DNA (657bp) protein (219aa)
MtmC n=1 Tax=uncultured bacterium RepID=K1YUC6_9BACT
MtmC {ECO:0000313|EMBL:EKD36148.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative cobalamin binding protein
13_1_40cm_2_scaffold_439_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

20872..22092
DNA (1221bp) protein (407aa)
GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RBG_13_Bathyarchaeota_38_9_curated
GMP synthase domain protein n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B9N9_ACIHW rbh
GMP synthase
13_1_40cm_2_scaffold_439_21
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

22096..22692
DNA (597bp) protein (199aa)
GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] subunit A {ECO:0000256|HAMAP-Rule:MF_01510}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_01510};; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_01510}; TaxID=102
GMP synthase [glutamine-hydrolyzing] subunit A n=3 Tax=Sulfolobus RepID=GUAAA_SULSO
13_1_40cm_2_scaffold_439_22
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

22787..24382
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LQ98_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69887.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_1_40cm_2_scaffold_439_23
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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24379..25302
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N336_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69886.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_1_40cm_2_scaffold_439_24
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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25369..26559
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0M0M3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69888.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_1_40cm_2_scaffold_439_25
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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26693..27439
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N813_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69885.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_1_40cm_2_scaffold_439_26
unknown

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comp(27411..27614)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_2_scaffold_439_27
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(27749..30550)
DNA (2802bp) protein (934aa)
AAA ATPase (EC:3.6.4.3)
AAA family ATPase, CDC48 subfamily n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QP14_VULDI
cdc48-2; AAA family ATPase; K13525 transitional endoplasmic reticulum ATPase Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_2_scaffold_439_28
unknown

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comp(30554..31411)
DNA (858bp) protein (286aa)

This feature has no annotations

13_1_40cm_2_scaffold_439_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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31598..32200
DNA (603bp) protein (201aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_439_30
unknown

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comp(32433..33107)
DNA (675bp) protein (225aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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