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13_1_40cm_2_scaffold_412

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_412_1
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..642)
DNA (642bp) protein (214aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASN7_RUBXD
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67471.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
13_1_40cm_2_scaffold_412_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(760..1317)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT
efp; elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Elongation factor P
13_1_40cm_2_scaffold_412_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(1368..2801)
DNA (1434bp) protein (478aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
hypothetical protein id=14425464 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_40cm_2_scaffold_412_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3032..3910
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA91_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_412_5
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4179..4592
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XW15_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXU87091.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
13_1_40cm_2_scaffold_412_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4714..5649
DNA (936bp) protein (312aa)
L-proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
proline dehydrogenase (EC:1.5.99.8)
Proline dehydrogenase id=4924569 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_2_scaffold_412_7
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5723..6889
DNA (1167bp) protein (389aa)
Class-V aminotransferase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BTY4_STRBB
class V aminotransferase
Class V aminotransferase {ECO:0000313|EMBL:AJT63872.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
13_1_40cm_2_scaffold_412_8

Not on your lists

7151..7435
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC68_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ10177.1}; TaxID=455560 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10H12.;"
hypothetical protein
13_1_40cm_2_scaffold_412_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(7445..8347)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN20_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68120.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_2_scaffold_412_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(8348..9256)
DNA (909bp) protein (303aa)
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
Putative DNA recombination protein id=4226599 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_412_11
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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comp(9288..10217)
DNA (930bp) protein (310aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PKH1_9CYAN
response regulator receiver modulated diguanylate cyclase
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:AFY33289.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC
13_1_40cm_2_scaffold_412_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10319..10951)
DNA (633bp) protein (211aa)
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
LuxR family transcriptional regulator
13_1_40cm_2_scaffold_412_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

11060..12559
DNA (1500bp) protein (500aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFQ7_ANAD2 id=5223517 bin=16ft_combo_ws3_JS1 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_2_scaffold_412_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12522..13340)
DNA (819bp) protein (273aa)
Putative transmembrane anti-sigma factor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG29_9CHLR
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EFH88731.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kt
putative transmembrane anti-sigma factor
13_1_40cm_2_scaffold_412_15
unknown

Not on your lists

comp(14114..14431)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_2_scaffold_412_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14520..15056)
DNA (537bp) protein (179aa)
hypothetical protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IE67_ANADE
hypothetical protein
13_1_40cm_2_scaffold_412_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15121..16206)
DNA (1086bp) protein (362aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Xanthine and Co dehydrogenase maturation factor id=4186361 bin=GWF2_Lentisphaerae_57_35 species=Halosarcina pallida genus=Halosarcina taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
XshC-Cox1-family protein
13_1_40cm_2_scaffold_412_18
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16190..17341)
DNA (1152bp) protein (384aa)
VWA containing CoxE family protein id=4590706 bin=GWC2_Chloroflexi_73_18 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
VWA containing CoxE family protein; K07161 Tax=GWC2_RIF_CHLX_73_18_curated
VWA containing CoxE family protein
13_1_40cm_2_scaffold_412_19
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(17338..18249)
DNA (912bp) protein (304aa)
ATPase associated with various cellular activities, AAA_5 id=4590705 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ATPase Tax=GWC2_RIF_CHLX_73_18_curated
ATPase
13_1_40cm_2_scaffold_412_20
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18261..18722)
DNA (462bp) protein (154aa)
Carbon monoxide dehydrogenase subunit G n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6U2_9CHLR
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:EFH80703.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
carbon monoxide dehydrogenase subunit G
13_1_40cm_2_scaffold_412_21
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18722..19579)
DNA (858bp) protein (286aa)
carbon-monoxide dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=GWC2_RIF_CHLX_73_18_curated
Carbon monoxide dehydrogenase, medium subunit id=4729351 bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
molybdopterin dehydrogenase FAD-binding protein
13_1_40cm_2_scaffold_412_22
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19576..21942)
DNA (2367bp) protein (789aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WU36_KYRT2
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ADG07288.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.
13_1_40cm_2_scaffold_412_23
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21955..22419)
DNA (465bp) protein (155aa)
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=GWC2_RIF_CHLX_73_18_curated
(2Fe-2S)-binding domain protein id=4729353 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
[2Fe-2S] binding domain-containing protein
13_1_40cm_2_scaffold_412_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22523..23674
DNA (1152bp) protein (384aa)
56kDa selenium binding protein (SBP56) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8N0_SINAD
56kDa selenium binding protein (SBP56)
56kDa selenium binding protein (SBP56) {ECO:0000313|EMBL:AGA24986.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sin
13_1_40cm_2_scaffold_412_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23804..24490
DNA (687bp) protein (229aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH21_9BACT rbh
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas met
HAD family hydrolase
13_1_40cm_2_scaffold_412_26
unknown

Not on your lists

comp(24585..25001)
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_40cm_2_scaffold_412_27
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25239..26372)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39PY1_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33693.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallire
13_1_40cm_2_scaffold_412_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26375..26815)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035E6308
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AHG91609.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_412_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26797..28539)
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000376786C
PQQ-dependent dehydrogenase, methanol/ethanol family
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:AHG91607.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_412_30

Not on your lists

28607..29635
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ED79_RUNSL
Marine sediment metagenome DNA, contig: S12H4_L01509 {ECO:0000313|EMBL:GAI87705.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Displaying items 1-30 of 49 in total

View Taxonomy