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13_1_40cm_2_scaffold_46777

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_46777_1
unknown

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comp(240..830)
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_2_scaffold_46777_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1296..1967
DNA (672bp) protein (224aa)
Binding-protein dependent transport system inner membrane protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LB20_9PROT rbh
Binding-protein dependent transport system inner membrane protein {ECO:0000313|EMBL:CDX51596.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Me
binding-protein dependent transport system inner membrane protein
13_1_40cm_2_scaffold_46777_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2408..2710
DNA (303bp) protein (101aa)
ABC transporter n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2KZQ1_9PROT
Taurine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX51597.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
ABC transporter
13_1_40cm_2_scaffold_46777_4
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

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2827..3231
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E5FD0
hypothetical protein
All2017 protein {ECO:0000313|EMBL:BAB73716.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
13_1_40cm_2_scaffold_46777_5
unknown

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comp(3241..3507)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_2_scaffold_46777_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3748..4011
DNA (264bp) protein (88aa)
id=4657425 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4657425 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_2_scaffold_46777_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4052..4882
DNA (831bp) protein (277aa)
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) id=4527544 bin=GWC2_Methylomirabilis_70_16 species=uncultured Chloroflexi bacterium HF0200_06I16 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_46777_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5119..6705
DNA (1587bp) protein (529aa)
putative histidine kinase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Histidine kinase id=4849342 bin=GWC2_Methylomirabilis_70_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histidine kinase
13_1_40cm_2_scaffold_46777_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6709..7221)
DNA (513bp) protein (171aa)
two-component system sensor protein (EC:2.7.3.-) Tax=GWA2_Rokubacteria_73_35_curated
cetoacetate metabolism regulatory protein atoC id=2772883 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two-component, sigma-54 specific, transcriptional regulator, Fis family
13_1_40cm_2_scaffold_46777_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7268..7489
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003666B00
cupin region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cupin
Displaying 10 items

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