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13_1_40cm_2_scaffold_47610

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_47610_1
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..212)
DNA (210bp) protein (70aa)
Tax=RBG_13_Deltaproteobacteria_65_10_curated
13_1_40cm_2_scaffold_47610_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1224..1547
DNA (324bp) protein (108aa)
gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=GWA2_Rokubacteria_70_23_curated
Gamma-glutamyltransferase id=3249133 bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
gamma-glutamyltransferase
13_1_40cm_2_scaffold_47610_3
unknown

Not on your lists

comp(1564..1818)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_2_scaffold_47610_4
unknown

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2371..2727
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_2_scaffold_47610_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2616..3305)
DNA (690bp) protein (230aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=1709660 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_47610_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3332..3706
DNA (375bp) protein (125aa)
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hslR; Hsp15 family heat shock protein; K04762 ribosome-associated heat shock protein Hsp15 id=14627276 bin=bin7_NC10_sister species=Leucobacter sp. UCD-THU genus=Leucobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
heat shock protein Hsp15
13_1_40cm_2_scaffold_47610_7
unknown

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3708..3833
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_2_scaffold_47610_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3833..4291
DNA (459bp) protein (153aa)
putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative sensor histidine kinase id=4194125 bin=GWC2_Methylomirabilis_70_24 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Crp/Fnr family transcriptional regulator
13_1_40cm_2_scaffold_47610_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(4319..4738)
DNA (420bp) protein (140aa)
h16_A2129; Zn-dependent hydrolase id=14625954 bin=bin7_NC10_sister species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
h16_A2129; Zn-dependent hydrolase Tax=CSP1_6_Rokubacteria
hypothetical protein
Displaying 9 items

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