ggKbase home page

13_1_40cm_2_scaffold_5537

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5537_1

Not on your lists

comp(687..1271)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JA61_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38991.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_40cm_2_scaffold_5537_2
unknown

Not on your lists

comp(1281..1487)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_2_scaffold_5537_3
unknown

Not on your lists

1656..1919
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_2_scaffold_5537_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(1794..2249)
DNA (456bp) protein (152aa)
50S ribosomal protein L31e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IJ55_NITGG
ribosomal protein L31e; K02910 large subunit ribosomal protein L31e Tax=RBG_16_Archaea_50_20_curated
rpl31e; 50S ribosomal protein L31e
13_1_40cm_2_scaffold_5537_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2411..2755)
DNA (345bp) protein (115aa)
DNA-binding protein Mhar_1733 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQU8_METH6
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_5537_6
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3293..3595)
DNA (303bp) protein (101aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
UPI0003D1A2D4 related cluster n=1 Tax=unknown RepID=UPI0003D1A2D4
ribonuclease P protein component 4
13_1_40cm_2_scaffold_5537_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

3656..4381
DNA (726bp) protein (242aa)
16S rRNA methyltransferase n=1 Tax=Thermococcus zilligii RepID=UPI000299E84C
ribosome biogenesis protein; K14568 essential for mitotic growth 1 Tax=RBG_13_Bathyarchaeota_38_9_curated
ribosome biogenesis protein
13_1_40cm_2_scaffold_5537_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

4419..4805
DNA (387bp) protein (129aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_5537_9
unknown

Not on your lists

4932..5549
DNA (618bp) protein (206aa)

This feature has no annotations

13_1_40cm_2_scaffold_5537_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(5546..6547)
DNA (1002bp) protein (334aa)
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] id=14425044 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=CSP1_2_Dadabacteria
glycine cleavage system t protein (EC:2.1.2.10)
13_1_40cm_2_scaffold_5537_11
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6587..7099)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI000367F08C
Uncharacterized protein {ECO:0000313|EMBL:KFA92879.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_1_40cm_2_scaffold_5537_12
Thermoplasmatales archaeon A-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

7434..8240
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0N732_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB71126.1}; TaxID=667135 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon A-pl
13_1_40cm_2_scaffold_5537_13

Not on your lists

8537..9391
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDH1_ARCPA
Marine sediment metagenome DNA, contig: S03H2_L06909 {ECO:0000313|EMBL:GAH35488.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_40cm_2_scaffold_5537_14
unknown

Not on your lists

9417..10298
DNA (882bp) protein (294aa)

This feature has no annotations

13_1_40cm_2_scaffold_5537_15
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10299..11891
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WPV0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY51422.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
13_1_40cm_2_scaffold_5537_16
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11919..12392
DNA (474bp) protein (158aa)
ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4] id=24653455 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Ribonuclease HI {ECO:0000313|EMBL:ERG87924.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
ribonuclease H
13_1_40cm_2_scaffold_5537_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

12728..13423
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG08_NITGG
hypothetical protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_5537_18
unknown

Not on your lists

comp(13466..13693)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_2_scaffold_5537_19
Leptospira borgpetersenii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13760..13966)
DNA (207bp) protein (69aa)
Putative glyoxal reductase n=1 Tax=Leptospira borgpetersenii serovar Pomona str. 200901868 RepID=M6W5Z4_LEPBO
aldo/keto reductase
Putative glyoxal reductase {ECO:0000313|EMBL:EMJ82077.1}; TaxID=1303729 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira borgpetersenii serovar Hardjo-b
Displaying 19 items

View Taxonomy