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13_1_40cm_2_scaffold_6939

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_6939_1
unknown

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comp(1..471)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_2_scaffold_6939_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(473..2041)
DNA (1569bp) protein (523aa)
amidohydrolase 3; K07047 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
amidohydrolase 3; K07047 id=14632547 bin=bin9_gal15 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
amidohydrolase 3
13_1_40cm_2_scaffold_6939_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(2041..2691)
DNA (651bp) protein (217aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=PIMT_METMJ
protein-L-isoaspartate O-methyltransferase
13_1_40cm_2_scaffold_6939_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(2780..3307)
DNA (528bp) protein (176aa)
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1] Tax=RBG_16_Euryarchaeota_68_13_curated
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1] id=14424554 bin=bin1_lowGC species=Mycobacterium hassiacum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
carbonate hydratase (EC:4.2.1.-)
13_1_40cm_2_scaffold_6939_5
CSP1_5_NC10, NC10, Bacteria

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comp(3307..4164)
DNA (858bp) protein (286aa)
Rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] id=14431442 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 rbh
Rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=CSP1_5_NC10
Rhodanese domain-containing protein
13_1_40cm_2_scaffold_6939_6
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4350..4844
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HBW0_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM68514.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcal
hypothetical protein
13_1_40cm_2_scaffold_6939_7
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(4841..5545)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D498B
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_16_Chloroflexi_68_14_curated
hydrolase
13_1_40cm_2_scaffold_6939_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5542..6060)
DNA (519bp) protein (173aa)
tartrate dehydrogenase/tartrate decarboxylase/D-malate dehydrogenase (EC:1.1.1.83 1.1.1.93 4.1.1.73)
tartrate dehydrogenase/tartrate decarboxylase/D-malate dehydrogenase (EC:1.1.1.83 1.1.1.93 4.1.1.73); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.8
Tartrate dehydrogenase/tartrate decarboxylase/D-malate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADL7_GEMAT
13_1_40cm_2_scaffold_6939_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6584..6973
DNA (390bp) protein (130aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_2_scaffold_6939_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(6974..7297)
DNA (324bp) protein (108aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=mine drainage metagenome RepID=E6PDE6_9ZZZZ
alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
alkyl hydroperoxide reductase
13_1_40cm_2_scaffold_6939_11
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8104..8640)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y219_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE15951.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balea
13_1_40cm_2_scaffold_6939_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(8637..9329)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00036A40D8
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ACZ39390.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sou
13_1_40cm_2_scaffold_6939_13
unknown

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9597..10412
DNA (816bp) protein (272aa)

This feature has no annotations

13_1_40cm_2_scaffold_6939_trna_1
unknown

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comp(10436..10509)
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_6939_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(10727..11203)
DNA (477bp) protein (159aa)
PPOX class putative F420-dependent enzyme n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAW9_SPHTD
PPOX class putative F420-dependent enzyme
PPOX class putative F420-dependent enzyme {ECO:0000313|EMBL:ACZ39916.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Spha
13_1_40cm_2_scaffold_6939_15
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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11294..11986
DNA (693bp) protein (231aa)
two component transcriptional regulator, winged helix family; K07667 two-component system, OmpR family, KDP operon response regulator KdpE id=14629315 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
two component transcriptional regulator, winged helix family; K07667 two-component system, OmpR family, KDP operon response regulator KdpE Tax=CSP1_4_Chloroflexi
two component transcriptional regulator PhoB, winged helix family
13_1_40cm_2_scaffold_6939_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12036..12770
DNA (735bp) protein (245aa)
two-component system response regulator; K07670 two-component system, OmpR family, response regulator MtrA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
two component transcriptional regulator, winged helix family; K07667 two-component system, OmpR family, KDP operon response regulator KdpE id=14629315 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
two component transcriptional regulator, winged helix family
13_1_40cm_2_scaffold_6939_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12784..13854)
DNA (1071bp) protein (357aa)
glycerol-3-phosphate dehydrogenase (NAD(P)(+)); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B8G4_HERA2 rbh
glycerol-3-phosphate dehydrogenase (NAD(P)(+))
13_1_40cm_2_scaffold_6939_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13933..14358)
DNA (426bp) protein (142aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCZ8_THET1
hypothetical protein
Displaying 19 items

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