ggKbase home page

13_1_40cm_2_scaffold_7443

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_7443_1
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

78..1124
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF7_NITGG
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_2_scaffold_7443_2
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

1129..2493
DNA (1365bp) protein (455aa)
Nucleotide sugar dehydrogenase n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J443_MARPK
nucleotide sugar dehydrogenase
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:AEX85858.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 /
13_1_40cm_2_scaffold_7443_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2542..3048
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B657C2
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
amidohydrolase
13_1_40cm_2_scaffold_7443_4
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

Not on your lists

comp(3014..4393)
DNA (1380bp) protein (460aa)
Phosphomannomutase {ECO:0000313|EMBL:EMR73552.1}; EC=5.4.2.8 {ECO:0000313|EMBL:EMR73552.1};; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archa
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphomannomutase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TA45_9ARCH
13_1_40cm_2_scaffold_7443_5

Not on your lists

4564..5463
DNA (900bp) protein (300aa)
Kinase (Pok) {ECO:0000313|EMBL:AIF10696.1}; EC=2.7.1.169 {ECO:0000313|EMBL:AIF10696.1};; TaxID=1456163 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeo
GHMP kinase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R685_SPISS
GHMP kinase
13_1_40cm_2_scaffold_7443_6
Pyrobaculum sp. 1860, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

5460..6215
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Pyrobaculum sp. 1860 RepID=G7VCX6_9CREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET32665.1}; TaxID=1104324 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum sp. 1860.;"
13_1_40cm_2_scaffold_7443_7
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

6212..7078
DNA (867bp) protein (289aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase; K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FDX8_9DELT rbh
13_1_40cm_2_scaffold_7443_8
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7079..7999
DNA (921bp) protein (307aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=633147 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobia
2-dehydropantoate 2-reductase n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QZT9_OLSUV
13_1_40cm_2_scaffold_7443_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(8016..8816)
DNA (801bp) protein (267aa)
Marine sediment metagenome DNA, contig: S03H2_S30297 Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_7443_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8848..9114)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX12_THEPD
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_2_scaffold_7443_11
unknown

Not on your lists

9278..9643
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_2_scaffold_7443_12
Flavobacteria bacterium MS024-3C, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9650..10420
DNA (771bp) protein (257aa)
Glycosyl transferase family 2 n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BM69_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EEG43270.1}; TaxID=487797 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium MS024-3C.;"
wcaA4; wcaa4
13_1_40cm_2_scaffold_7443_13
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

Not on your lists

10441..11157
DNA (717bp) protein (239aa)
Nucleoside-diphosphate-sugar pyrophosphorylase n=1 Tax=Pyrobaculum oguniense (strain DSM 13380 / JCM 10595 / TE7) RepID=H6Q9R9_PYROT
nucleotidyl transferase Tax=RIFOXYD1_FULL_OD1_48_21_curated
Nucleoside-diphosphate-sugar pyrophosphorylase
13_1_40cm_2_scaffold_7443_14
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

11295..12134
DNA (840bp) protein (280aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Pacearch_01
putative sugar dehydratase/epimerase YfnG
NAD dependent epimerase/dehydratase id=14429836 bin=bin3_NC10 species=Methanosaeta concilii genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
13_1_40cm_2_scaffold_7443_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12378..12686)
DNA (309bp) protein (103aa)
Protein translation factor SUI1 homolog n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3C4_9ARCH
translation initiation factor aSUI1 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor SUI1
13_1_40cm_2_scaffold_7443_16
unknown

Not on your lists

12949..13107
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_2_scaffold_7443_17
unknown

Not on your lists

13144..13389
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_2_scaffold_7443_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13392..14291)
DNA (900bp) protein (300aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
tfb1; transcription initiation factor IIB
Displaying 18 items

View Taxonomy