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13_1_40cm_2_scaffold_706

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_706_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

174..1547
DNA (1374bp) protein (458aa)
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4187612 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
uncharacterized protein involved in propionate catabolism
13_1_40cm_2_scaffold_706_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1558..2751
DNA (1194bp) protein (398aa)
alpha-methylacyl-CoA racemase (EC:5.1.99.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-carnitine dehydratase/bile acid-inducible protein F id=4169030 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alpha-methylacyl-CoA racemase
13_1_40cm_2_scaffold_706_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2761..3969
DNA (1209bp) protein (403aa)
Sugar phosphate permease n=1 Tax=Burkholderia sp. BT03 RepID=J2H0Y3_9BURK
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
major facilitator superfamily protein
13_1_40cm_2_scaffold_706_4
unknown

Not on your lists

4012..4116
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_2_scaffold_706_5
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4123..4419
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WI82_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDR37465.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grim
hypothetical protein
13_1_40cm_2_scaffold_706_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4406..5491)
DNA (1086bp) protein (362aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Patatin id=4226283 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_706_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5795..7057
DNA (1263bp) protein (421aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626624 bin=bin7_NC10_sister species=Caminibacter mediatlanticus genus=Caminibacter taxon_order=Nautiliales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_706_8
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7125..8213
DNA (1089bp) protein (363aa)
Lipolytic enzyme, G-D-S-L family n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L6K4_MAGSM rbh
GDSL family lipase
Lipolytic enzyme, G-D-S-L family {ECO:0000313|EMBL:ABK43597.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magneto
13_1_40cm_2_scaffold_706_9

Not on your lists

8383..8898
DNA (516bp) protein (172aa)
Pirin {ECO:0000313|EMBL:AIA11757.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Pirin domain protein id=4784621 bin=GWC2_Methylomirabilis_70_16 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Pirin domain-containing protein
13_1_40cm_2_scaffold_706_10
unknown

Not on your lists

8919..9308
DNA (390bp) protein (130aa)
hypothetical protein
13_1_40cm_2_scaffold_706_11
unknown

Not on your lists

comp(9305..9556)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_2_scaffold_706_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9666..10652)
DNA (987bp) protein (329aa)
putative hydrolase transmembrane protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
putative hydrolase transmembrane protein id=14429957 bin=bin3_NC10 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative hydrolase transmembrane protein
13_1_40cm_2_scaffold_706_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10667..12652)
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UND8_METS4 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX09020.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_2_scaffold_706_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12649..13239)
DNA (591bp) protein (197aa)
Cytochrome c, class I n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VRM9_POLNA
class I cytochrome c Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
class I cytochrome c
13_1_40cm_2_scaffold_706_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13338..14516)
DNA (1179bp) protein (393aa)
L-sorbosone dehydrogenase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJM2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative membrane-bound dehydrogenase oxidoreductase protein
13_1_40cm_2_scaffold_706_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14585..15685)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YFB4_SORCE
hypothetical protein
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=1254432 species="Bacteria; Proteobacteria;
13_1_40cm_2_scaffold_706_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15682..15960)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YFB4_SORCE
hypothetical protein
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=1254432 species="Bacteria; Proteobacteria;
13_1_40cm_2_scaffold_706_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15963..16694)
DNA (732bp) protein (244aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinolin
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000374A36D
hypothetical protein
13_1_40cm_2_scaffold_706_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16691..17593)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E0E19
hypothetical protein
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; TaxID=1254432 species="Bacteria; Proteobacteria;
13_1_40cm_2_scaffold_706_20
unknown

Not on your lists

comp(17665..17763)
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_2_scaffold_706_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17882..18301)
DNA (420bp) protein (140aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Two-component hybrid sensor and regulator id=2811822 bin=GWC2_Methylomirabilis_70_24 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_2_scaffold_706_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18305..18736)
DNA (432bp) protein (144aa)
Uncharacterized protein id=2811820 bin=GWC2_Methylomirabilis_70_24 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_2_scaffold_706_23
unknown

Not on your lists

comp(19035..19370)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_2_scaffold_706_24
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(19387..20328)
DNA (942bp) protein (314aa)
Nucleotidyl transferase id=14626204 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Nucleotidyl transferase Tax=CSP1_6_Rokubacteria
Nucleotidyl transferase
13_1_40cm_2_scaffold_706_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(20328..20720)
DNA (393bp) protein (131aa)
id=4695004 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4695004 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_2_scaffold_706_26
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(20710..21042)
DNA (333bp) protein (111aa)
hypothetical protein id=5002882 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_40cm_2_scaffold_706_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(21220..21537)
DNA (318bp) protein (106aa)
id=3938571 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=3938571 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_706_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(21534..21800)
DNA (267bp) protein (89aa)
rbpA; RNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
RNP-1 like RNA-binding protein id=1884756 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNP-1 like RNA-binding protein
Displaying 28 items

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