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13_1_40cm_2_scaffold_812

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_812_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..1012
DNA (1011bp) protein (337aa)
Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULD6_ANASK
major facilitator transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
major facilitator superfamily protein
13_1_40cm_2_scaffold_812_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1064..1702
DNA (639bp) protein (213aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_812_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1889..3985
DNA (2097bp) protein (699aa)
Putative elongation factor G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I9_GEMAT
putative elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
small GTP-binding protein
13_1_40cm_2_scaffold_812_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

4147..5124
DNA (978bp) protein (326aa)
hypothetical protein id=14632678 bin=bin9_gal15 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein
13_1_40cm_2_scaffold_812_5
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5136..6158)
DNA (1023bp) protein (341aa)
peptidylarginine deiminase-like protein (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12] Tax=RBG_16_Deltaproteobacteria_58_17_curated
Agmatine deiminase id=3982000 bin=GWC2_Syntrophobacterales_56_13 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
aguA; agmatine deiminase
13_1_40cm_2_scaffold_812_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6178..7056)
DNA (879bp) protein (293aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQA8_KORVE
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ABF40942.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
13_1_40cm_2_scaffold_812_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7164..11552)
DNA (4389bp) protein (1463aa)
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:BAH40123.1}; EC=1.4.1.13 {ECO:0000313|EMBL:BAH40123.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC96_GEMAT
13_1_40cm_2_scaffold_812_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11721..12650)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI0003821674
kamA; Lysine 2,3-aminomutase Tax=RBG_16_Gemmatimonadetes_66_8_curated
kamA; Lysine 2,3-aminomutase
13_1_40cm_2_scaffold_812_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12766..13266)
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QG74_DESB2
N-acetyltransferase GCN5 Tax=RBG_16_Gemmatimonadetes_66_8_curated
N-acetyltransferase GCN5
13_1_40cm_2_scaffold_812_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13217..14191)
DNA (975bp) protein (325aa)
D-alanine--D-alanine ligase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein id=2423735 bin=GWA2_Ignavibacteriae_54_16_partial species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
ATP-grasp enzyme, D-alanine-D-alanine ligase
13_1_40cm_2_scaffold_812_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14188..15258)
DNA (1071bp) protein (357aa)
D-alanine-D-alanine ligase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein id=3454609 bin=GWC2_Deltaproteobacteria_42_51 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
D-alanine-D-alanine ligase-like protein
13_1_40cm_2_scaffold_812_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15322..16113)
DNA (792bp) protein (264aa)
thyX; thymidylate synthase (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=GWC2_Gemmatimonadetes_71_10_curated
thyX; thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J0_GEMAT
13_1_40cm_2_scaffold_812_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16080..17618)
DNA (1539bp) protein (513aa)
Putative FAD linked oxidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J2_GEMAT
putative FAD linked oxidase; K06911 Tax=GWC2_Gemmatimonadetes_71_10_curated
FAD linked oxidase domain protein
13_1_40cm_2_scaffold_812_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17667..18488
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B78EDF
hypothetical protein; K09729 hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_2_scaffold_812_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18441..19769)
DNA (1329bp) protein (443aa)
rocC; amino acid permease rocC Tax=RBG_16_Gemmatimonadetes_66_8_curated
amino acid permease id=24444110 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
rocC; amino acid permease rocC
13_1_40cm_2_scaffold_812_16
unknown

Not on your lists

comp(19750..20172)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_2_scaffold_812_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20172..20747)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002ECF251
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_812_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20747..21256)
DNA (510bp) protein (170aa)
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJN9_9BACT
13_1_40cm_2_scaffold_812_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21581..22423)
DNA (843bp) protein (281aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_2_scaffold_812_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22423..23274)
DNA (852bp) protein (284aa)
Band 7 protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFY0_DESB2
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_812_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23271..24467)
DNA (1197bp) protein (399aa)
putative acyltransferase (EC:2.3.1.9); K07508 acetyl-CoA acyltransferase 2 [EC:2.3.1.16] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase id=1250066 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_2_scaffold_812_22
unknown

Not on your lists

comp(24601..24804)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_2_scaffold_812_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(24822..25874)
DNA (1053bp) protein (351aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CDM65964.1}; EC=1.1.1.85 {ECO:0000313|EMBL:CDM65964.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
3-isopropylmalate dehydrogenase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ME8_STIAD
3-isopropylmalate dehydrogenase
13_1_40cm_2_scaffold_812_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25871..26563)
DNA (693bp) protein (231aa)
Double zinc ribbon
Double zinc ribbon Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_812_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26542..27057)
DNA (516bp) protein (172aa)
CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cd allosteric enzyme id=3383322 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
CMP/dCMP deaminase
13_1_40cm_2_scaffold_812_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27044..27622)
DNA (579bp) protein (193aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ribonuclease HI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K0_GEMAT
ribonuclease H
13_1_40cm_2_scaffold_812_27
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27619..28368)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003454FC1
Universal stress protein UspA {ECO:0000313|EMBL:KGJ21662.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus s
13_1_40cm_2_scaffold_812_28
unknown

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comp(28373..28621)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_2_scaffold_812_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28629..29585)
DNA (957bp) protein (319aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
selD; Selenide, water dikinase (Selenophosphate synthetase) (Selenium donor protein) (EC:2.7.9.3) id=14431457 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
selenide, water dikinase
13_1_40cm_2_scaffold_812_30
unknown

Not on your lists

comp(29693..30073)
DNA (381bp) protein (127aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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