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13_1_40cm_2_scaffold_814

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_814_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..173)
DNA (171bp) protein (57aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIK64636.1}; EC=1.3.8.- {ECO:0000313|EMBL:EIK64636.1};; TaxID=1038923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae
Butyryl-CoA dehydrogenase n=2 Tax=Pseudomonas RepID=F2KGA2_PSEBN
butyryl-CoA dehydrogenase
13_1_40cm_2_scaffold_814_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(157..1005)
DNA (849bp) protein (283aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X3_GEMAT
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
13_1_40cm_2_scaffold_814_3
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1002..1865)
DNA (864bp) protein (288aa)
Abortive infection protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V6K5_TERSS
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ADV82744.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC
13_1_40cm_2_scaffold_814_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1865..2431)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZF11_TERRK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_814_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2431..3594)
DNA (1164bp) protein (388aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Acetyl-CoA C-acetyltransferase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MRQ1_9BACT
acetyl-CoA acetyltransferase
13_1_40cm_2_scaffold_814_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3594..5552)
DNA (1959bp) protein (653aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Threonine--tRNA ligase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AAU1_THEID
threonyl-tRNA synthetase
13_1_40cm_2_scaffold_814_7
unknown

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comp(5555..5734)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_2_scaffold_814_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5771..8419
DNA (2649bp) protein (883aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Valine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W5_GEMAT
Valyl-tRNA synthetase
13_1_40cm_2_scaffold_814_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8362..9690
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_814_10
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9687..10997
DNA (1311bp) protein (437aa)
selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L70_SYMTH
13_1_40cm_2_scaffold_814_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10990..11550
DNA (561bp) protein (187aa)
gmhB; D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6I7_HERA2
histidinol-phosphate phosphatase family protein
13_1_40cm_2_scaffold_814_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11612..13150
DNA (1539bp) protein (513aa)
Peptidase S1 and S6 chymotrypsin/Hap n=2 Tax=Arthrospira RepID=K1W2M3_ARTPT
peptidase domain-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase domain protein
13_1_40cm_2_scaffold_814_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13272..13817
DNA (546bp) protein (182aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphoribosylglycinamide formyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W2_GEMAT
phosphoribosylglycinamide formyltransferase
13_1_40cm_2_scaffold_814_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13814..14653
DNA (840bp) protein (280aa)
Peptidase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEB7_TERRK
Putative M42 glutamyl aminopeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase family protein
13_1_40cm_2_scaffold_814_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14650..15705
DNA (1056bp) protein (352aa)
Peptidase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEB7_TERRK
peptidase M42 family protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase family protein
13_1_40cm_2_scaffold_814_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15702..17240
DNA (1539bp) protein (513aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.
Bifunctional purine biosynthesis protein PurH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W1_GEMAT
Bifunctional purine biosynthesis protein purH
13_1_40cm_2_scaffold_814_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17253..19658
DNA (2406bp) protein (802aa)
Uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR30_9CHLB
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein of unknown function DUF2723
13_1_40cm_2_scaffold_814_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19655..20743)
DNA (1089bp) protein (363aa)
Putative Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HHB3_9PROT
RND family efflux transporter MFP subunit Tax=GWC2_Gemmatimonadetes_71_10_curated
secretion protein
13_1_40cm_2_scaffold_814_19
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20743..22029)
DNA (1287bp) protein (429aa)
Putative outer membrane macrolide efflux protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CKE9_MYXFH
putative outer membrane macrolide efflux protein
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvu
13_1_40cm_2_scaffold_814_20
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(22029..25163)
DNA (3135bp) protein (1045aa)
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RBG_16_Zixibacteria_53_22_curated
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=24506371 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
multidrug transporter AcrB
13_1_40cm_2_scaffold_814_trna_1
unknown

Not on your lists

25398..25480
DNA (83bp)
transferRNA
13_1_40cm_2_scaffold_814_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

25528..26199
DNA (672bp) protein (224aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0S9_CONWI
CDP-alcohol phosphatidyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
CDP-alcohol phosphatidyltransferase
13_1_40cm_2_scaffold_814_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26184..28064
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A837_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_814_23
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

28175..29674
DNA (1500bp) protein (500aa)
Putative protease with the C-terminal PDZ domain n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T1G1_9CYAN
putative protease with the C-terminal PDZ domain
Putative protease with the C-terminal PDZ domain {ECO:0000313|EMBL:AFY76001.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
13_1_40cm_2_scaffold_814_trna_2
unknown

Not on your lists

29702..29792
DNA (91bp)
transferRNA
13_1_40cm_2_scaffold_814_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

29808..31091
DNA (1284bp) protein (428aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glutamate--tRNA ligase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYI5_9BACT
glutamyl-tRNA synthetase
13_1_40cm_2_scaffold_814_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

31102..32172
DNA (1071bp) protein (357aa)
Plastocyanin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQR1_KORVE
blue (type 1) copper domain protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AHG89356.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_814_26
RBG_13_RIF08_66_14_curated, RIF8, Bacteria

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32169..32558
DNA (390bp) protein (130aa)
Putative Cupredoxin n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSF8_THIA3
PKD domain-containing protein Tax=RBG_13_RIF08_66_14_curated
putative Cupredoxin
13_1_40cm_2_scaffold_814_27
RLO_PLX_64_10, Bacteria

Not on your lists

32645..33100
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B30A1E
CHRD domain containing protein
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_1_40cm_2_scaffold_814_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(33164..34399)
DNA (1236bp) protein (412aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DB3_SOLUE
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG88575.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 41 in total

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