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13_1_40cm_2_scaffold_793

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_793_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3..326)
DNA (324bp) protein (108aa)
carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) (EC:1.2.99.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) (EC:1.2.99.2)
Carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) id=3847107 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_793_2
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(323..1039)
DNA (717bp) protein (239aa)
Nicotinamidase-like amidase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VSA8_9BRAD
Nicotinamidase-like amidase {ECO:0000313|EMBL:EJN09072.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" so
pncA; bifunctional pyrazinamidase/nicotinamidase
13_1_40cm_2_scaffold_793_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1039..2292)
DNA (1254bp) protein (418aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626658 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_793_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(2306..3016)
DNA (711bp) protein (237aa)
pdhR; GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_cura
transcriptional regulator id=14626765 bin=bin7_NC10_sister species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
transcriptional regulator
13_1_40cm_2_scaffold_793_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3108..4091
DNA (984bp) protein (328aa)
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=GWA2_Rokubacteria_70_23_curated
Uroporphyrinogen decarboxylase id=4355655 bin=GWF2_Methylomirabilis_70_14 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
uroporphyrinogen decarboxylase
13_1_40cm_2_scaffold_793_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4164..5534
DNA (1371bp) protein (457aa)
Oligopeptide ABC transporter substrate-binding protein id=3334459 bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
oligopeptide ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_793_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5570..5935
DNA (366bp) protein (122aa)
cupin 2 barrel domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Putative uncharacterized protein id=2193858 bin=GWB2_Deltaproteobacteria_65_81 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cupin
13_1_40cm_2_scaffold_793_8
Amorphus coralli, Amorphus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5935..6285
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000381661B
13_1_40cm_2_scaffold_793_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6289..7131
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031FBBB7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87560.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
13_1_40cm_2_scaffold_793_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7138..7605
DNA (468bp) protein (156aa)
DoxX family protein; K15977 putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K15977 putative oxidoreductase id=14431357 bin=bin3_NC10 species=Rhizobium sp. genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_793_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7640..8704)
DNA (1065bp) protein (355aa)
Glycosyl hydrolase, BNR repeat protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46P13_CUPPJ
BNR repeat-containing glycosyl hydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
BNR repeat-containing glycosyl hydrolase
13_1_40cm_2_scaffold_793_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8701..9909)
DNA (1209bp) protein (403aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=GWA2_Rokubacteria_70_23_curated
carbon-monoxide dehydrogenase (EC:1.2.99.2)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037155A5
13_1_40cm_2_scaffold_793_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9923..10981)
DNA (1059bp) protein (353aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein id=3162221 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_793_14
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11108..12301
DNA (1194bp) protein (398aa)
Extracellular ligand-binding receptor n=1 Tax=Geobacter sp. (strain M18) RepID=E8WUI0_GEOS8
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
extracellular ligand-binding receptor
13_1_40cm_2_scaffold_793_15
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12317..13198
DNA (882bp) protein (294aa)
Inner-membrane translocator n=3 Tax=Rhodobacter RepID=A3PQM7_RHOS1
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
Inner-membrane translocator precursor
13_1_40cm_2_scaffold_793_16
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13195..14139
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002ED1D0F
putative high-affinity branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
branched-chain amino acid ABC transporter permease
13_1_40cm_2_scaffold_793_17
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14145..14867)
DNA (723bp) protein (241aa)
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) id=1906303 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
13_1_40cm_2_scaffold_793_18
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14842..15543)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000321BD9A
livG3; putative branched-chain amino acids ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_793_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(15603..16487)
DNA (885bp) protein (295aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8T3_SPHTD
molybdopterin dehydrogenase FAD-binding protein
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ACZ40226.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae
13_1_40cm_2_scaffold_793_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16484..17542)
DNA (1059bp) protein (353aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=3729544 bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_40cm_2_scaffold_793_21
unknown

Not on your lists

17622..18812
DNA (1191bp) protein (397aa)

This feature has no annotations

13_1_40cm_2_scaffold_793_22
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18749..19240)
DNA (492bp) protein (164aa)
(2Fe-2S)-binding domain-containing protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGF2_THEM7
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain-containing protein {ECO:0000313|EMBL:ADU51604.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobac
13_1_40cm_2_scaffold_793_23
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19240..19608)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JCY9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE72953.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
13_1_40cm_2_scaffold_793_24
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19646..20038)
DNA (393bp) protein (131aa)
Endoribonuclease L-PSP n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3W9_9RHIZ
translation initiation inhibitor Tax=RBG_16_Betaproteobacteria_64_18_curated
putative translation initiation inhibitor, yjgF family
13_1_40cm_2_scaffold_793_25
unknown

Not on your lists

comp(20059..20340)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_2_scaffold_793_26
unknown

Not on your lists

comp(20337..20513)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_2_scaffold_793_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20542..21111)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI0003612CC3
putative dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_2_scaffold_793_28
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21173..21490)
DNA (318bp) protein (106aa)
dioxygenase, ferredoxin subunit Tax=RBG_13_Deltaproteobacteria_65_10_curated
Dioxygenase, ferredoxin subunit id=4745862 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Rieske (2Fe-2S) domain-containing protein
13_1_40cm_2_scaffold_793_29

Not on your lists

comp(21499..22338)
DNA (840bp) protein (280aa)
Leu/ile/val-binding protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK45_THEYD
Uncharacterized protein {ECO:0000313|EMBL:KKK93679.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
leu/ile/val-binding protein
13_1_40cm_2_scaffold_793_30
unknown

Not on your lists

22566..22808
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying items 1-30 of 50 in total

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