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13_1_40cm_2_scaffold_7775

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_7775_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3..221)
DNA (219bp) protein (73aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
glycerol-3-phosphate ABC transporter ATP-binding protein; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter id=2930701 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_7775_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(233..1084)
DNA (852bp) protein (284aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Probable sugar ABC transporter, permease protein id=3709050 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sugar ABC transporter permease
13_1_40cm_2_scaffold_7775_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1345..1965)
DNA (621bp) protein (207aa)
Putative uncharacterized protein id=3842142 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter permease
13_1_40cm_2_scaffold_7775_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2263..3417)
DNA (1155bp) protein (385aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=2228895 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
sugar ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_7775_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3422..4831)
DNA (1410bp) protein (470aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=3842144 bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_7775_6
unknown

Not on your lists

5376..5648
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_2_scaffold_7775_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5552..6715)
DNA (1164bp) protein (388aa)
Uncharacterized protein id=3020051 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
membrane protein
13_1_40cm_2_scaffold_7775_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6743..7879
DNA (1137bp) protein (379aa)
Putative integral membrane protein id=2228897 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane protein Tax=GWA2_Rokubacteria_73_35_curated
integral membrane protein
13_1_40cm_2_scaffold_7775_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7811..8497)
DNA (687bp) protein (229aa)
Major facilitator superfamily MFS_1 id=2228940 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_7775_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8881..9246)
DNA (366bp) protein (122aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-deoxy-manno-octulosonate cytidylyltransferase id=2228942 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-deoxy-D-manno-octulosonate cytidylyltransferase
13_1_40cm_2_scaffold_7775_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9554..10048)
DNA (495bp) protein (165aa)
luciferase family protein Tax=GWA2_Rokubacteria_73_35_curated
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase id=14627263 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative luciferase-like monooxygenase
13_1_40cm_2_scaffold_7775_12
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(10099..10485)
DNA (387bp) protein (129aa)
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase id=14627263 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hmd; coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
FMN-dependent monooxygenase
13_1_40cm_2_scaffold_7775_13
unknown

Not on your lists

10568..10792
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_2_scaffold_7775_14

Not on your lists

10814..11743
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0VLE7_MYCFO
hypothetical protein
Marine sediment metagenome DNA, contig: S01H4_C02139 {ECO:0000313|EMBL:GAG57046.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_2_scaffold_7775_15
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

11816..12589
DNA (774bp) protein (258aa)
enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
enoyl-ACP reductase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4403F
13_1_40cm_2_scaffold_7775_16
Bacillus clausii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12615..13910
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WCQ0_BACSK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD65860.1}; TaxID=66692 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus clausii (strain KSM-K16).;"
13_1_40cm_2_scaffold_7775_17
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13920..14537
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIH1_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB96124.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica s
13_1_40cm_2_scaffold_7775_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14572..15456
DNA (885bp) protein (295aa)
DMT family permease id=4622876 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DMT family permease Tax=GWA2_Rokubacteria_70_23_curated
DMT family permease
13_1_40cm_2_scaffold_7775_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15453..15809)
DNA (357bp) protein (119aa)
hypothetical protein id=14627437 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
Displaying 19 items

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