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13_1_40cm_2_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_9_1
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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45..356
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXK3_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05299.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadens
13_1_40cm_2_scaffold_9_2
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

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362..628
DNA (267bp) protein (89aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
hypothetical protein id=7722273 bin=CNBR_ACT species=Asticcacaulis biprosthecium genus=Asticcacaulis taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
13_1_40cm_2_scaffold_9_3
unknown

Not on your lists

656..1072
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_40cm_2_scaffold_9_4
unknown

Not on your lists

1168..1410
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_2_scaffold_9_5
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

1562..3643
DNA (2082bp) protein (694aa)
Marine sediment metagenome DNA, contig: S01H1_S15856 Tax=RBG_13_Bathyarchaeota_52_12_curated
13_1_40cm_2_scaffold_9_6
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3664..4287)
DNA (624bp) protein (208aa)
cation transporter n=1 Tax=Lactobacillus versmoldensis RepID=UPI0002492893
putative cation efflux protein Tax=RBG_16_RIF_CHLX_69_14_curated
Cobalt-zinc-cadmium resistance protein
13_1_40cm_2_scaffold_9_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(4284..6635)
DNA (2352bp) protein (784aa)
DNA polymerase Pol2; K02319 DNA polymerase I [EC:2.7.7.7] Tax=RBG_16_Archaea_50_20_curated
DNA polymerase n=1 Tax=Thermofilum sp. 1910b RepID=S5Z6M3_9CREN
DNA polymerase
13_1_40cm_2_scaffold_9_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


6700..7143
DNA (444bp) protein (148aa)
30S ribosomal protein S11 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EDM3_PYRF1
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Archaea_50_20_curated
ribosomal protein S11P
13_1_40cm_2_scaffold_9_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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7300..8346
DNA (1047bp) protein (349aa)
Glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037DA33D
glycine hydroxymethyltransferase
13_1_40cm_2_scaffold_9_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8691..9068)
DNA (378bp) protein (126aa)
Translation initiation inhibitor, putative n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AF38_PYRYC
hypothetical protein; K07567 TdcF protein Tax=RBG_16_Euryarchaeota_68_12_curated
endoribonuclease
13_1_40cm_2_scaffold_9_11
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9732..10445)
DNA (714bp) protein (238aa)
coenzyme F420-dependent NADP oxidoreductase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624F3A
hypothetical protein; K06988 Tax=RBG_16_Deltaproteobacteria_71_12_curated
RSp1147; transmemembrane reductasease oxidoreductase
13_1_40cm_2_scaffold_9_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10485..11360
DNA (876bp) protein (292aa)
PREDICTED: serine racemase-like isoform X3 n=1 Tax=Aplysia californica RepID=UPI0003593F8F
Pyridoxal-5'-phosphate-dependent protein beta subunit
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AHG92280.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_9_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(11361..12161)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00036AC969
competence damage-inducible protein A; K03742 competence/damage-inducible protein CinA Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_2_scaffold_9_14
unknown

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comp(12198..12734)
DNA (537bp) protein (179aa)
hypothetical protein
13_1_40cm_2_scaffold_9_15
unknown

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13032..14462
DNA (1431bp) protein (477aa)

This feature has no annotations

13_1_40cm_2_scaffold_9_16
unknown

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14827..15351
DNA (525bp) protein (175aa)

This feature has no annotations

13_1_40cm_2_scaffold_9_17
unknown

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15446..15631
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_2_scaffold_9_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15639..16313
DNA (675bp) protein (225aa)
O-methyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP05_SORCE rbh
O-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:AGP32378.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellu
13_1_40cm_2_scaffold_9_19
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(16813..17871)
DNA (1059bp) protein (353aa)
L-threonine 3-dehydrogenase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9Q7_9BACI
L-threonine 3-dehydrogenase Tax=CG_Micra_04
L-threonine 3-dehydrogenase
13_1_40cm_2_scaffold_9_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

18141..19391
DNA (1251bp) protein (417aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RBG_13_Bathyarchaeota_46_16b_curated
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036F62FC
13_1_40cm_2_scaffold_9_21
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(19619..20230)
DNA (612bp) protein (204aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinac
putative 5,10-methylenetetrahydrofolate reductase
Methylenetetrahydrofolate reductase id=3992704 bin=GWF2_Bacteroidetes_40_14 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
13_1_40cm_2_scaffold_9_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20521..21726)
DNA (1206bp) protein (402aa)
methionine synthase (B12-independent); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RBG_16_Archaea_50_20_curated
methionine synthase (B12-independent); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14631529 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
methionine synthase (B12-independent) (EC:2.1.1.14)
13_1_40cm_2_scaffold_9_23
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(21726..22769)
DNA (1044bp) protein (348aa)
cobalamin-independent synthase MetE-like protein id=14631530 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
cobalamin-independent synthase MetE-like protein Tax=CSP1_3_Armatimonadetes
metE; cobalamin-independent synthase MetE
13_1_40cm_2_scaffold_9_24
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

22882..23391
DNA (510bp) protein (170aa)
Putative transcriptional regulator with C-terminal CBS domain n=2 Tax=Candidatus Methanomethylophilus RepID=M9SI13_9EURY
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
putative transcriptional regulator with C-terminal CBS domain
13_1_40cm_2_scaffold_9_25
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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23540..24850
DNA (1311bp) protein (437aa)
hypothetical protein containing KaiC-domain Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_9_26
unknown

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comp(25092..25259)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_2_scaffold_9_27
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(25459..26175)
DNA (717bp) protein (239aa)
Pheromone shutdown protein (TraB) n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UZP3_PYRAB
signaling protein
Pheromone shutdown protein (TraB) {ECO:0000313|EMBL:CCE70515.1}; Signaling protein {ECO:0000313|EMBL:CAB50013.1}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococca
13_1_40cm_2_scaffold_9_28
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

26217..27029
DNA (813bp) protein (271aa)
phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI00036BCEBC
phosphoserine phosphatase
13_1_40cm_2_scaffold_9_29
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

27026..27838
DNA (813bp) protein (271aa)
Pnp; purine nucleoside phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_16_Archaea_50_20_curated
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=MTIP_METTH
methylthioadenosine phosphorylase
13_1_40cm_2_scaffold_9_30
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

27831..28613
DNA (783bp) protein (261aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RBG_16_Archaea_50_20_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-L14 RepID=UPI0003793FA5
Displaying items 1-30 of 60 in total

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