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13_1_40cm_2_scaffold_979

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_979_1
unknown

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173..496
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_2_scaffold_979_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(510..1685)
DNA (1176bp) protein (392aa)
putative sensor histidine kinase (EC:2.7.13.3)
Putative Sonsor histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBU0_9BACT
PAS domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
13_1_40cm_2_scaffold_979_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2093..2893
DNA (801bp) protein (267aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK9_KORVE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABF43291.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_1_40cm_2_scaffold_979_4
unknown

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comp(2907..3107)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_2_scaffold_979_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3163..3429)
DNA (267bp) protein (89aa)
Gas vesicle G n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5D6_GEOUR
gas vesicle protein G Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gas vesicle protein G
13_1_40cm_2_scaffold_979_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3454..4326)
DNA (873bp) protein (291aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE rbh
gas vesicle synthesis GvpLGvpF
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ABF41402.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_2_scaffold_979_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4377..6503)
DNA (2127bp) protein (709aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ6_KORVE rbh
PAS/PAC sensor signal transduction histidine kinase
13_1_40cm_2_scaffold_979_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6536..6841)
DNA (306bp) protein (102aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
gas vesicle protein GvpA
Gas vesicle structural protein {ECO:0000255|HAMAP-Rule:MF_00576}; Short=GVP {ECO:0000255|HAMAP-Rule:MF_00576};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
13_1_40cm_2_scaffold_979_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6866..7165)
DNA (300bp) protein (100aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ4_KORVE
gas vesicle protein GvpA
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_1_40cm_2_scaffold_979_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7352..7696)
DNA (345bp) protein (115aa)
Gas vesicle K n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ3_KORVE
gas vesicle K
Gas vesicle K {ECO:0000313|EMBL:ABF41407.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
13_1_40cm_2_scaffold_979_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7696..8349)
DNA (654bp) protein (218aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ2_KORVE
gas vesicle synthesis GvpLGvpF
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ABF41408.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_2_scaffold_979_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8349..8603)
DNA (255bp) protein (85aa)
Gas vesicle protein GVPa n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ1_KORVE
gas vesicle protein GvpA
Gas vesicle protein GVPa {ECO:0000313|EMBL:ABF41409.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
13_1_40cm_2_scaffold_979_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8641..9408)
DNA (768bp) protein (256aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ0_KORVE
gas vesicle synthesis GvpLGvpF
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ABF41410.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_2_scaffold_979_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9393..11291)
DNA (1899bp) protein (633aa)
Arsenite efflux ATP-binding protein ArsA {ECO:0000313|EMBL:ABF41411.1}; EC=3.6.3.16 {ECO:0000313|EMBL:ABF41411.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
Arsenite efflux ATP-binding protein ArsA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INY9_KORVE rbh
arsenite-transporting ATPase
13_1_40cm_2_scaffold_979_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11458..11961)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000377C0C3
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_2_scaffold_979_16
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(11982..12692)
DNA (711bp) protein (237aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003651092
fumarate reductase iron-sulfur subunit
13_1_40cm_2_scaffold_979_17
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(12695..14425)
DNA (1731bp) protein (577aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Succinate dehydrogenase (EC:1.3.99.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000363DC19
13_1_40cm_2_scaffold_979_18
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14422..15168)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000364220E
integral membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_40cm_2_scaffold_979_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15307..15675)
DNA (369bp) protein (123aa)
Type IV pilus assembly PilZ n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ87_KORVE
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABF40963.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
13_1_40cm_2_scaffold_979_trna_1
unknown

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comp(15847..15918)
DNA (72bp)
transferRNA
13_1_40cm_2_scaffold_979_20
unknown

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comp(15941..16417)
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_40cm_2_scaffold_979_21

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comp(16418..16891)
DNA (474bp) protein (158aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LX88_SYNAS
Marine sediment metagenome DNA, contig: S12H4_S07170 {ECO:0000313|EMBL:GAI89568.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 22 items

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