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13_1_40cm_2_scaffold_12213

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_12213_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..566)
DNA (564bp) protein (188aa)
UPI0003CF656F related cluster n=1 Tax=unknown RepID=UPI0003CF656F
Uncharacterized protein {ECO:0000313|EMBL:ETW93865.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
taurine catabolism dioxygenase
13_1_40cm_2_scaffold_12213_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(617..1702)
DNA (1086bp) protein (362aa)
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7)
DNA polymerase IV id=4375097 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_12213_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2307..2486)
DNA (180bp) protein (60aa)
Excisionase/Xis, DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Excisionase/Xis, DNA-binding protein id=4848467 bin=GWA2_Methylomirabilis_73_35 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_12213_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2483..3145)
DNA (663bp) protein (221aa)
cysE; serine acetyltransferase (EC:2.3.1.30) Tax=GWA2_Rokubacteria_73_35_curated
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase id=4848469 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_12213_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3138..3518)
DNA (381bp) protein (127aa)
FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
nifU; FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins id=14625373 bin=bin7_NC10_sister species=Oscillibacter sp. 1-3 genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Iron-sulfur cluster assembly scaffold protein
13_1_40cm_2_scaffold_12213_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3515..4669)
DNA (1155bp) protein (385aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase id=4206292 bin=GWF2_Methylomirabilis_70_14 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_12213_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4712..5035
DNA (324bp) protein (108aa)
Putative uncharacterized protein id=3714008 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_12213_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5040..5396
DNA (357bp) protein (119aa)
Putative uncharacterized protein id=3714010 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_12213_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5396..5623
DNA (228bp) protein (76aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_40cm_2_scaffold_12213_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5731..5937)
DNA (207bp) protein (69aa)
Putative uncharacterized protein id=3714014 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
iscX; FeS assembly protein IscX
13_1_40cm_2_scaffold_12213_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(5957..6310)
DNA (354bp) protein (118aa)
fdxB; 2Fe-2S ferredoxin; K04755 ferredoxin, 2Fe-2S id=14625367 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
fdxB; 2Fe-2S ferredoxin; K04755 ferredoxin, 2Fe-2S Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ferredoxin, 2Fe-2S type, ISC system
13_1_40cm_2_scaffold_12213_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6310..6615)
DNA (306bp) protein (102aa)
hscA; chaperone protein HscA; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chaperone protein HscA (Hsc66) id=3714018 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dnaK; molecular chaperone DnaK
Displaying 12 items

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