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13_1_40cm_2_scaffold_40788

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_40788_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1..276)
DNA (276bp) protein (92aa)
2-oxopent-4-enoate hydratase (EC:4.2.1.80) Tax=GWA2_Rokubacteria_73_35_curated
4-oxalocrotonate decarboxylase (EC:4.1.1.77)
4-oxalocrotonate decarboxylase id=1890939 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_40788_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(273..437)
DNA (165bp) protein (55aa)
sir2 family protein; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
sat:SYN_01020 Sir2 family NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-] id=1241516 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
13_1_40cm_2_scaffold_40788_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(528..1328)
DNA (801bp) protein (267aa)
abortive infection protein; K07052 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Abortive infection protein id=1890947 bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
abortive infection protein
13_1_40cm_2_scaffold_40788_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1345..2748)
DNA (1404bp) protein (468aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWC2_Rokubacteria_70_16_curated
Amidase id=3014927 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
amidase
13_1_40cm_2_scaffold_40788_5
unknown

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comp(2741..2920)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_2_scaffold_40788_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2927..3301
DNA (375bp) protein (125aa)
dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
intradiol ring-cleavage dioxygenase id=14625204 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
intradiol ring-cleavage dioxygenase
Displaying 6 items

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