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13_1_40cm_2_scaffold_5291

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5291_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3..1265
DNA (1263bp) protein (421aa)
Bll6906 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EZ5_BRADU
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
isomerase
13_1_40cm_2_scaffold_5291_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1412..1831)
DNA (420bp) protein (140aa)
id=14626280 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14626280 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_5291_3
unknown

Not on your lists

comp(1904..2392)
DNA (489bp) protein (163aa)

This feature has no annotations

13_1_40cm_2_scaffold_5291_4
RHI_OD1_Uhrbacteria_60_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2421..2675)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Bacillus macauensis ZFHKF-1 RepID=I8AF04_9BACI
putative nuclease; K07461 putative endonuclease Tax=RIFCSPHIGHO2_12_FULL_OD1_Uhrbacteria_60_25_curated
excinuclease ABC C subunit domain-containing protein
13_1_40cm_2_scaffold_5291_5
unknown

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comp(2672..2800)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_2_scaffold_5291_6
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3637..4581)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI0003669DC0
ECF subfamily RNA polymerase sigma-24 factor
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AJY76664.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus b
13_1_40cm_2_scaffold_5291_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4593..4892)
DNA (300bp) protein (100aa)
ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4] Tax=GWC2_Rokubacteria_70_16_curated
Ribonuclease H id=4704588 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ribonuclease H
13_1_40cm_2_scaffold_5291_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5054..5767)
DNA (714bp) protein (238aa)
hypothetical protein id=14627037 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_2_scaffold_5291_trna_1
unknown

Not on your lists

comp(6036..6107)
DNA (72bp)
transferRNA
13_1_40cm_2_scaffold_5291_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6127..7977)
DNA (1851bp) protein (617aa)
RNA polymerase sigma factor RpoD id=3357851 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=GWC2_Rokubacteria_70_16_curated
RNA polymerase sigma factor RpoD
13_1_40cm_2_scaffold_5291_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7970..9781)
DNA (1812bp) protein (604aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA primase id=4785564 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA primase
13_1_40cm_2_scaffold_5291_11
unknown

Not on your lists

9940..10464
DNA (525bp) protein (175aa)

This feature has no annotations

Displaying 12 items

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