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13_1_40cm_2_scaffold_73878

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_73878_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3..440)
DNA (438bp) protein (146aa)
Metallophosphoesterase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG40_9BACT
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:CBE68721.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_2_scaffold_73878_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(486..1208)
DNA (723bp) protein (241aa)
Putative lipoprotein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG39_9BACT
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CBE68720.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_2_scaffold_73878_3
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(1414..2013)
DNA (600bp) protein (200aa)
Putative anti-sigma factor Tax=RBG_16_Armatimonadetes_67_12_curated
13_1_40cm_2_scaffold_73878_4
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(2000..2569)
DNA (570bp) protein (190aa)
RNA polymerase sigma factor n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UK08_ANASK
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlor
13_1_40cm_2_scaffold_73878_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2783..3631)
DNA (849bp) protein (283aa)
peptidase M48, Ste24p; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protease HtpX homolog id=4343487 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
peptidase M48, Ste24p
13_1_40cm_2_scaffold_73878_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3750..4259
DNA (510bp) protein (170aa)
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4343489 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_73878_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4272..4454
DNA (183bp) protein (61aa)
rpmF; 50S ribosomal protein L32 RpmF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L32 id=4343491 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpmF; 50S ribosomal protein L32 RpmF
13_1_40cm_2_scaffold_73878_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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4477..5475
DNA (999bp) protein (333aa)
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Phosphate acyltransferase id=2638116 bin=GWF2_Methylomirabilis_70_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
plsX; fatty acid/phospholipid synthesis protein, methyltransferase domain
13_1_40cm_2_scaffold_73878_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5750..6406
DNA (657bp) protein (219aa)
FabH; 3-oxoacyl-(acyl-carrier-protein) synthase III; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 id=2638121 bin=GWF2_Methylomirabilis_70_14 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FabH; 3-oxoacyl-(acyl-carrier-protein) synthase III
13_1_40cm_2_scaffold_73878_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6483..7424
DNA (942bp) protein (314aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] id=14625126 bin=bin7_NC10_sister species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
fabD; malonyl-CoA--acyl carrier protein transacylase
13_1_40cm_2_scaffold_73878_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7607..8257
DNA (651bp) protein (217aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-oxoacyl-(Acyl-carrier-protein) reductase FabG id=2547036 bin=GWC2_Methylomirabilis_70_16 species=Paenibacillus alvei genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) reductase
13_1_40cm_2_scaffold_73878_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8287..8523
DNA (237bp) protein (79aa)
acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acpP; acyl carrier protein; K02078 acyl carrier protein id=14625124 bin=bin7_NC10_sister species=Desulfurobacterium sp. TC5-1 genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin7_NC10_sister organism_group=NC10
acpP; acyl carrier protein
13_1_40cm_2_scaffold_73878_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8527..9789
DNA (1263bp) protein (421aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=2638134 bin=GWF2_Methylomirabilis_70_14 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fabF; 3-oxoacyl-(acyl-carrier-protein) synthase 2
Displaying 13 items

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