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13_1_40cm_2_scaffold_93141

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_93141_1
unknown

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comp(1..222)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_2_scaffold_93141_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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532..1119
DNA (588bp) protein (196aa)
TetR family transcriptional regulator; K13770 TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TetR family id=1890906 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TetR family transcriptional regulator
13_1_40cm_2_scaffold_93141_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1109..1882
DNA (774bp) protein (258aa)
enoyl-CoA hydratase/carnithine racemase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Enoyl-CoA hydratase/isomerase id=1890904 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
3-hydroxybutyryl-CoA dehydrogenase
13_1_40cm_2_scaffold_93141_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1886..2635
DNA (750bp) protein (250aa)
dehydrogenase/reductase 11 (EC:1.1.1.-); K00100 [EC:1.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dehydrogenase/reductase 11 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) id=3526405 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_93141_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2668..2988
DNA (321bp) protein (107aa)
sterol-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative sterol carrier protein id=4320175 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sterol-binding protein
13_1_40cm_2_scaffold_93141_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3400..3624)
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_40cm_2_scaffold_93141_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4059..4574
DNA (516bp) protein (172aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=3479314 bin=GWC2_Methylomirabilis_70_16 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_93141_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4571..5116
DNA (546bp) protein (182aa)
Acyl dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Acyl dehydratase id=3479315 bin=GWC2_Methylomirabilis_70_16 species=Caulobacter sp. genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl dehydratase
13_1_40cm_2_scaffold_93141_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5094..5837)
DNA (744bp) protein (248aa)
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=3479316 bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) reductase
13_1_40cm_2_scaffold_93141_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5953..6210
DNA (258bp) protein (86aa)
Uncharacterized protein conserved in bacteria id=3526397 bin=GWC2_Methylomirabilis_70_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
PHA accumulation regulator DNA-binding protein
Displaying 10 items

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