ggKbase home page

13_1_40cm_2_scaffold_9401

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_9401_1
unknown

Not on your lists

3..374
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_2_scaffold_9401_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(324..1067)
DNA (744bp) protein (248aa)
uncharacterized LOC100208015 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4806968 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidoglycan-binding LysM
13_1_40cm_2_scaffold_9401_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1067..1636)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=14628104 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
general secretion pathway protein, putative
13_1_40cm_2_scaffold_9401_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1633..3147)
DNA (1515bp) protein (505aa)
fimbrial assembly family protein; K02461 general secretion pathway protein L Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fimbrial assembly family protein id=4806970 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
fimbrial assembly family protein
13_1_40cm_2_scaffold_9401_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3235..4170)
DNA (936bp) protein (312aa)
general secretion pathway protein K; K02460 general secretion pathway protein K Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein K id=4806971 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_9401_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4167..4781)
DNA (615bp) protein (205aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4806972 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_9401_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4778..5413)
DNA (636bp) protein (212aa)
general secretion pathway protein H; K02458 general secretion pathway protein I Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative General secretion pathway protein I, GspI (Modular protein) id=3269003 bin=GWC2_Methylomirabilis_70_16 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
general secretion pathway protein H
13_1_40cm_2_scaffold_9401_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5410..5862)
DNA (453bp) protein (151aa)
xpsH; general secretion pathway protein H; K02457 general secretion pathway protein H Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
General secretion pathway protein H id=3269002 bin=GWC2_Methylomirabilis_70_16 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
general secretion pathway protein GspH
13_1_40cm_2_scaffold_9401_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5838..6224)
DNA (387bp) protein (129aa)
General secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Pseudopilin, cryptic, general secretion pathway id=3269001 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
general secretion pathway protein G
13_1_40cm_2_scaffold_9401_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6388..7599)
DNA (1212bp) protein (404aa)
gspF; general secretory pathway component, cryptic Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
gspF; general secretory pathway component, cryptic id=14627802 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gspF; general secretory pathway component, cryptic
13_1_40cm_2_scaffold_9401_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7606..9171)
DNA (1566bp) protein (522aa)
General secretion pathway protein E (Type II traffic warden ATPase) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein E (Type II traffic warden ATPase) id=14627801 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
General secretion pathway protein E (Type II traffic warden ATPase)
13_1_40cm_2_scaffold_9401_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9326..9928
DNA (603bp) protein (201aa)
Zinc/iron transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Zinc/iron transporter id=14627800 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Zinc/iron transporter
Displaying 12 items

View Taxonomy