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13_1_40cm_2_scaffold_36333

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_36333_1

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2..232
DNA (231bp) protein (77aa)
Marine sediment metagenome DNA, contig: S12H4_S15839 {ECO:0000313|EMBL:GAJ03959.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_2_scaffold_36333_trna_1
unknown

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353..426
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_36333_2
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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460..1164
DNA (705bp) protein (235aa)
Tetratricopeptide domain protein id=3588303 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
13_1_40cm_2_scaffold_36333_3
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1272..2621
DNA (1350bp) protein (450aa)
MATE family multidrug resistance protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AK88_IGNAJ rbh
MATE family multidrug resistance protein
MATE family multidrug resistance protein {ECO:0000313|EMBL:AFH49395.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" sourc
13_1_40cm_2_scaffold_36333_4
unknown

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comp(2624..3127)
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_40cm_2_scaffold_36333_5
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3141..4697
DNA (1557bp) protein (519aa)
protein serine/threonine phosphatase with GAF(s) sensor(s) Tax=GWA2_Ignavibacteria_54_16_curated
Serine phosphatase RsbU subunit sigma id=5017193 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome rbh
Serine phosphatase RsbU subunit sigma
13_1_40cm_2_scaffold_36333_6
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4720..5076
DNA (357bp) protein (119aa)
anti-sigma-factor antagonist Tax=GWA2_Ignavibacteria_54_16_curated
Anti-anti-sigma regulatory factor id=3656682 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
anti-sigma-factor antagonist
13_1_40cm_2_scaffold_36333_7
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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5033..5284
DNA (252bp) protein (84aa)
Anti-sigma regulatory factor Tax=GWA2_Ignavibacteria_54_16_curated
Anti-sigma regulatory factor id=5017191 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Displaying 8 items

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