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13_1_40cm_2_scaffold_58556

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_58556_1
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3..884)
DNA (882bp) protein (294aa)
Diguanylate cyclase id=4154711 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
diguanylate cyclase
13_1_40cm_2_scaffold_58556_2
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1103..1783
DNA (681bp) protein (227aa)
response regulator receiver sensor signal transduction histidine kinase Tax=GWA2_Ignavibacteriae_55_25_curated
Response regulator receiver sensor signal transduction histidine kinase id=5014969 bin=GWA2_Ignavibacteria_55_11 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
response receiver sensor histidine kinase
13_1_40cm_2_scaffold_58556_3
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2042..2518
DNA (477bp) protein (159aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGC5_IGNAJ
hypothetical protein
hypothetical protein Tax=GWA2_Ignavibacteriae_55_25_curated
13_1_40cm_2_scaffold_58556_4
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2571..3104
DNA (534bp) protein (178aa)
hypothetical protein Tax=RBG_16_Ignavibacteria_36_9_curated
NGG1p interacting factor 3 protein, NIF3 id=5014968 bin=GWA2_Ignavibacteria_55_11 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
13_1_40cm_2_scaffold_58556_5
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3101..3847
DNA (747bp) protein (249aa)
Zn-ribbon protein; K07164 Tax=GWA2_Ignavibacteriae_55_25_curated
Zn-ribbon protein id=5014967 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Zn-ribbon protein
13_1_40cm_2_scaffold_58556_6
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3844..4260
DNA (417bp) protein (139aa)
ribonuclease H Tax=GWA2_Ignavibacteriae_55_25_curated
Ribonuclease H id=5014966 bin=GWA2_Ignavibacteria_55_11 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
ribonuclease H
13_1_40cm_2_scaffold_58556_7
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4853..5767
DNA (915bp) protein (305aa)
recJ; ssDNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Single-stranded DNA-specific exonuclease id=4945032 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
single-stranded-DNA-specific exonuclease RecJ
Displaying 7 items

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