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13_1_40cm_2_scaffold_6276

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_6276_1
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(103..636)
DNA (534bp) protein (178aa)
hutU; urocanate hydratase; K01712 urocanate hydratase [EC:4.2.1.49] Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
hutU; urocanate hydratase
Urocanate hydratase id=3587994 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
13_1_40cm_2_scaffold_6276_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(611..1612)
DNA (1002bp) protein (334aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
Urocanate hydratase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHN8_IGNAJ
hutU; urocanate hydratase
13_1_40cm_2_scaffold_6276_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1702..2184)
DNA (483bp) protein (161aa)
hypothetical protein; K09129 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Putative uncharacterized protein id=8266098 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
13_1_40cm_2_scaffold_6276_4
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2756..2956
DNA (201bp) protein (67aa)
Cold-shock DNA-binding protein family id=3650105 bin=GWA2_Ignavibacteriae_54_16_partial species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=GWA2_Ignavibacteria_54_16_curated
cold-shock DNA-binding domain-containing protein
13_1_40cm_2_scaffold_6276_5
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3043..3246
DNA (204bp) protein (68aa)
Strongly similar to cold shock protein CspB id=3650108 bin=GWA2_Ignavibacteriae_54_16_partial species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
csp; Cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=GWA2_Ignavibacteria_54_16_curated
cold-shock protein
13_1_40cm_2_scaffold_6276_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3331..5943)
DNA (2613bp) protein (871aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Primosomal protein N' id=3311968 bin=GWA2_Ignavibacteria_55_11 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome rbh
priA; primosomal protein N'
13_1_40cm_2_scaffold_6276_7
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5956..6501)
DNA (546bp) protein (182aa)
Putative uncharacterized protein id=4966283 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
13_1_40cm_2_scaffold_6276_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(6517..7029)
DNA (513bp) protein (171aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] id=14424488 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=CSP1_2_Dadabacteria
carboxymethylenebutenolidase
Displaying 8 items

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