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13_1_40cm_2_scaffold_1770

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1770_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..390
DNA (390bp) protein (130aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4918811 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_2_scaffold_1770_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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392..2395
DNA (2004bp) protein (668aa)
Putative uncharacterized protein id=4527469 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_2_scaffold_1770_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

2463..3767
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI000379F146
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
extracellular solute-binding protein family 1
13_1_40cm_2_scaffold_1770_4
RBG_16_NC10_65_8_curated, NC10, Bacteria

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3791..4720
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FDC3D0
ABC-type transporter, integral membrane subunit Tax=RBG_16_NC10_65_8_curated
Binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_1770_5
R_NC10_66_22, NC10, Bacteria

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4717..5574
DNA (858bp) protein (286aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LR65_TEPAE
ABC-type transporter, integral membrane subunit Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter permease
13_1_40cm_2_scaffold_1770_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5839..6162
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:EEF57144.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
13_1_40cm_2_scaffold_1770_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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6353..6862
DNA (510bp) protein (170aa)
id=14627512 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_2_scaffold_1770_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6878..7447)
DNA (570bp) protein (190aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Orotate phosphoribosyltransferase id=4815545 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
orotate phosphoribosyltransferase
13_1_40cm_2_scaffold_1770_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7444..8175)
DNA (732bp) protein (244aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=GWA2_Rokubacteria_73_35_curated
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=4815544 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_1770_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(8162..11368)
DNA (3207bp) protein (1069aa)
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5) id=14625178 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
13_1_40cm_2_scaffold_1770_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11383..11649)
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4530407 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_1770_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11657..12781)
DNA (1125bp) protein (375aa)
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) id=14625175 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carA; carbamoyl phosphate synthase small subunit
13_1_40cm_2_scaffold_1770_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12778..13110)
DNA (333bp) protein (111aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase id=4530400 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 13 items

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