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13_1_40cm_2_scaffold_2574

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2574_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(94..885)
DNA (792bp) protein (264aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component (EC:3.6.3.25); K02049 NitT/TauT family transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component (EC:3.6.3.25)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component id=4827661 bin=GWA2_Methylomirabilis_73_35 species=Saccharomonospora viridis genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_2574_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(908..1267)
DNA (360bp) protein (120aa)
Putative Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein id=4827660 bin=GWA2_Methylomirabilis_73_35 species=Sinorhizobium medicae genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aliphatic sulfonates ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
aliphatic sulfonates ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_2574_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1886..2269)
DNA (384bp) protein (128aa)
Carboxymuconolactone decarboxylase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA8_ACIC1
peroxidase-like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
carboxymuconolactone decarboxylase
13_1_40cm_2_scaffold_2574_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2285..2539)
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
13_1_40cm_2_scaffold_2574_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2675..3901
DNA (1227bp) protein (409aa)
Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
13_1_40cm_2_scaffold_2574_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3898..4671
DNA (774bp) protein (258aa)
Alpha/beta hydrolase fold Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alpha/beta hydrolase fold id=2940473 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alpha/beta hydrolase fold
13_1_40cm_2_scaffold_2574_7
unknown

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4694..4837
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_2_scaffold_2574_8
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4813..4947
DNA (135bp) protein (45aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037AC153
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHD29989.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas den
13_1_40cm_2_scaffold_2574_9
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

4961..5761
DNA (801bp) protein (267aa)
Methyltransferase type 11 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBS4_ANADF
type 11 methyltransferase Tax=RBG_16_Acidobacteria_64_8_curated
type 11 methyltransferase
13_1_40cm_2_scaffold_2574_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5742..6626)
DNA (885bp) protein (295aa)
tartronate semialdehyde reductase (EC:1.1.1.60)
Tartronate semialdehyde reductase id=4547685 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Rahnella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-hydroxy-3-oxopropionate reductase Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_2_scaffold_2574_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6736..7977)
DNA (1242bp) protein (414aa)
Extracellular ligand-binding receptor Tax=GWC2_Rokubacteria_70_16_curated
Extracellular ligand-binding receptor id=2654115 bin=GWC2_Methylomirabilis_70_24 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Extracellular ligand-binding receptor
13_1_40cm_2_scaffold_2574_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8002..8637)
DNA (636bp) protein (212aa)
isochorismatase hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Isochorismatase hydrolase id=4827652 bin=GWA2_Methylomirabilis_73_35 species=Hoeflea phototrophica genus=Hoeflea taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
isochorismatase hydrolase
13_1_40cm_2_scaffold_2574_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(8634..9269)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035D4091
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_2_scaffold_2574_14
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9444..10070
DNA (627bp) protein (209aa)
Extracellular ligand-binding receptor n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VW52_9BURK
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EGF33166.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae b
Extracellular ligand-binding receptor
Displaying 14 items

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